RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 DOPEY2Q9Y3R5 2298 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 TEX15Q9BXT5 2789 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 TRAV9-1A0A075B6T8 112 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 TRBV7-1A0A0A6YYK4 115 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 SNURFLB1AK76 121 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 IGHG2P01859 326 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 TPPP2P59282 170 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 RAB4BP61018 213 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 C19orf54Q5BKX5 351 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 Q5PR19 223 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 FAM231DQ6ZW35 169 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 OR10D4PQ8NGN7 298 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 ZFAND3Q9H8U3 227 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 SMAD5-AS1Q9Y6J3 95 aa8.06□□□□□ -1.12
HDAC9-210ENST00000428307 A0A1B0GUS0 222 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 GRIFINA4D1Z8 144 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 IGF1P05019 195 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 Q86TA4 180 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 LYPD1Q8N2G4 141 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
HDAC9-210ENST00000428307 MXRA5Q9NR99 2828 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 TLN2Q9Y4G6 2542 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 APOHP02749 345 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-210ENST00000428307 PPIFP30405 207 aaKnown RBP8.05□□□□□ -1.12
HDAC9-210ENST00000428307 TMEM183AQ8IXX5 376 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 DAZAP1Q96EP5 407 aaKnown RBP8.05□□□□□ -1.12
HDAC9-210ENST00000428307 NAT8BQ9UHF3 227 aa8.05□□□□□ -1.12
HDAC9-210ENST00000428307 CLPSL1A2RUU4 121 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 M0QZK8 103 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 BUB3O43684 328 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 TRBV12-3P01733 135 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 PF4V1P10720 104 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 HLA-DMBP28068 263 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 LOXL1Q08397 574 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-210ENST00000428307 PDE6HQ13956 83 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 TMEM95Q3KNT9 176 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 MBD6Q96DN6 1003 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 GRAMD2BQ96HH9 432 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 Q96MF0 132 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 NEU1Q99519 415 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 ZNF469Q96JG9 3925 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-210ENST00000428307 ZNF785A8K8V0 405 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 K7EQM0 130 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 P01737 135 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 IGHV4-31P0DP07 118 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 CRIP2P52943 208 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-210ENST00000428307 PSG3Q16557 428 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 TCF24Q7RTU0 167 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 SMIM12Q96EX1 92 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 NIT2Q9NQR4 276 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 PSG8Q9UQ74 426 aa8.04□□□□□ -1.12
HDAC9-210ENST00000428307 HELZ2Q9BYK8 2649 aaKnown RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 IGKV2-40A0A087WW87 121 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 IZUMO1RA6ND01 250 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 FAM223BA6NKX1 122 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 ZNF705FA8MVS1 300 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 IGKV2D-40P01614 121 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 SMIM6P0DI80 62 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 CSN1S1P47710 185 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PRRC2AP48634 2157 aaKnown RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 RPL19P84098 196 aaKnown RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PSG9Q00887 426 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 FAM223AQ8IWN6 122 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 TMEM256Q8N2U0 113 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 GNB1LQ9BYB4 327 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 C19orf71A6NCJ1 209 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 J3QLI3 93 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 ARL3P36405 182 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 RELQ04864 619 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PYY3Q5JQD4 70 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 COA6Q5JTJ3 125 aaKnown RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PRR31Q5SQ13 230 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 TMEM136Q6ZRR5 245 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 TMEM75Q8N9X5 138 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 ZC2HC1AQ96GY0 325 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
HDAC9-210ENST00000428307 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 ZNF331Q9NQX6 463 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-210ENST00000428307 NUPR1O60356 82 aa8.02□□□□□ -1.13
HDAC9-210ENST00000428307 GZMBP10144 247 aa8.02□□□□□ -1.13
HDAC9-210ENST00000428307 CAMPP49913 170 aa8.02□□□□□ -1.13
HDAC9-210ENST00000428307 METTL26Q96S19 204 aa8.02□□□□□ -1.13
HDAC9-210ENST00000428307 CHEK1O14757 476 aa8.02□□□□□ -1.13
HDAC9-210ENST00000428307 IGHG4P01861 327 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms