RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 PEX7O00628 323 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 C1orf194Q5T5A4 169 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 UNQ9165/PRO28630Q6UXU0 137 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 LINC01551Q86U37 167 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 OR8I2Q8N0Y5 310 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 C5orf17Q8NAS9 161 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 TUBA4BQ9H853 241 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 SMAD5-AS1Q9Y6J3 95 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 HELTA6NFD8 242 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 TSPAN4O14817 238 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 SLC25A5P05141 298 aaKnown RBP13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 SIGLEC15Q6ZMC9 328 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 UBE2E2Q96LR5 201 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 GPR82Q96P67 336 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 ZNF747Q9BV97 191 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 LY96Q9Y6Y9 160 aa13.74□□□□□ -0.21
AC055811.2-201ENST00000427497 SLC17A3O00476 420 aa13.73□□□□□ -0.21
AC055811.2-201ENST00000427497 APOHP02749 345 aaPredicted RBP13.73□□□□□ -0.21
AC055811.2-201ENST00000427497 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.73□□□□□ -0.21
AC055811.2-201ENST00000427497 ZNF207O43670 478 aaKnown RBP13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 GNG5P63218 68 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 KLHDC1Q8N7A1 406 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 OR5B12Q96R08 314 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 TMEM242Q9NWH2 141 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 MGAM2Q2M2H8 2515 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 A0A087X0K7 114 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 TAS2R60P59551 318 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 RNF212Q495C1 297 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 EXOC3-AS1Q8N2X6 119 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 OCC1Q8TAD7 63 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 IGF2BP2-AS1Q96M15 143 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 ATG101Q9BSB4 218 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 KLF12Q9Y4X4 402 aa13.72□□□□□ -0.21
AC055811.2-201ENST00000427497 ZNF253O75346 499 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 TCRAP04437 139 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 CNN1P51911 297 aaKnown RBP13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 CENPWQ5EE01 88 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 SHISA2Q6UWI4 295 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 GPHB5Q86YW7 130 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 WIPF2Q8TF74 440 aaPredicted RBP13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 ISOC2Q96AB3 205 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 LINC00479Q96M42 142 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 CTDSP1Q9GZU7 261 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 PRELID1Q9Y255 219 aa13.71□□□□□ -0.21
AC055811.2-201ENST00000427497 ATF4P18848 351 aaPredicted RBP13.7□□□□□ -0.22
AC055811.2-201ENST00000427497 GNG4P50150 75 aa13.7□□□□□ -0.22
AC055811.2-201ENST00000427497 C16orf54Q6UWD8 224 aa13.7□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV3-66A0A0C4DH42 116 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 GALR1P47211 349 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 PSG9Q00887 426 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 TMEM183BQ1AE95 376 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV3OR16-13A0A075B7E8 117 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV3-49A0A0A0MS15 119 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV3-74A0A0B4J1X5 117 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 K7EMT4 169 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 K7EN84 100 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 ISLRO14498 428 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 IGLV2-8P01709 118 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 CRYBA1P05813 215 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 FAM106AQ4KMX7 169 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 C15orf54Q8N8G6 183 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 YPEL4Q96NS1 127 aa13.69□□□□□ -0.22
AC055811.2-201ENST00000427497 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 COLCA2A8K830 154 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 S100A9P06702 114 aaKnown RBP13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 ARL6IP6Q8N6S5 226 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 ANAPC16Q96DE5 110 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 AAMDCQ9H7C9 122 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
AC055811.2-201ENST00000427497 ZNF320A2RRD8 509 aa13.67□□□□□ -0.22
AC055811.2-201ENST00000427497 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
AC055811.2-201ENST00000427497 ZNF331Q9NQX6 463 aaPredicted RBP13.67□□□□□ -0.22
AC055811.2-201ENST00000427497 RPH3ALQ9UNE2 315 aa13.67□□□□□ -0.22
AC055811.2-201ENST00000427497 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 MEOX2P50222 304 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 RPEL1Q2QD12 228 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 PRR31Q5SQ13 230 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 FMC1Q96HJ9 113 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV4OR15-8A0A075B7B6 117 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 A0A087WW49 117 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 IGHV7-4-1A0A0J9YVY3 117 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 A0A1W2PS18 150 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 UBE2G1P62253 170 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 TM4SF20Q53R12 229 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
AC055811.2-201ENST00000427497 TRBV6-1A0A0K0K1D8 114 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms