RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 IL17RELQ6ZVW7 336 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 ZNF625Q96I27 306 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 SYS1-DBNDD2H3BUS1 97 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 SHANK2-AS3Q9BTD1 123 aa14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 MCRIP2Q9BUT9 160 aaKnown RBP14.54□□□□□ -0.08
ARHGEF28-203ENST00000426542 DKK1O94907 266 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 DOCK6Q96HP0 2047 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 C3orf56Q8N813 242 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 ZNF48Q96MX3 618 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 FAM186AA6NE01 2351 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 TRAV8-3A0A0A6YYJ7 113 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 C1orf194Q5T5A4 169 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 LIME1Q9H400 295 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 PRIMA1Q86XR5 153 aa14.53□□□□□ -0.08
ARHGEF28-203ENST00000426542 GBF1Q92538 1859 aa14.52□□□□□ -0.08
ARHGEF28-203ENST00000426542 SP5Q6BEB4 398 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 LINC00479Q96M42 142 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 CFHR3Q02985 330 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE2BQ13066 116 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 C1orf122Q6ZSJ8 110 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 SRSF8Q9BRL6 282 aaKnown RBP14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 OCIAD2Q56VL3 154 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 ZFAND6Q6FIF0 208 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 MAPK1IP1LQ8NDC0 245 aa14.52□□□□□ -0.09
ARHGEF28-203ENST00000426542 A0A1W2PPI3 338 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ATP6V0E1O15342 81 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 PRR30Q53SZ7 412 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ARMS2P0C7Q2 107 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 LY6G5BQ8NDX9 201 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 TNFRSF6BO95407 300 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q6ZRM9 215 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q6ZS49 121 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 FREM3P0C091 2139 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 ESDP10768 282 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 C8orf49Q96NF6 230 aa14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 MRPL27Q9P0M9 148 aaKnown RBP14.51□□□□□ -0.09
ARHGEF28-203ENST00000426542 KNCNA6PVL3 124 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 VWC2LB2RUY7 222 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 MSMBP08118 114 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 DLX4Q92988 240 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 ZC2HC1BQ5TFG8 222 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 FOXL2NBQ6ZUU3 175 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 TRPT1Q86TN4 253 aaKnown RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 REG4Q9BYZ8 158 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 SSBP2P81877 361 aaPredicted RBP14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 OVOL2Q9BRP0 275 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 XCL2Q9UBD3 114 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 FNDC10F2Z333 226 aa14.5□□□□□ -0.09
ARHGEF28-203ENST00000426542 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 HS3ST6Q96QI5 342 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 LINC01619G3V211 115 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 KIR3DS1Q14943 382 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 NDUFS8O00217 210 aa14.49□□□□□ -0.09
ARHGEF28-203ENST00000426542 GFRA4Q9GZZ7 299 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 IGHV3-16A0A0C4DH30 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 TMEM75Q8N9X5 138 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 FAM110DQ8TAY7 271 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 KLK9Q9UKQ9 250 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 UBE2E1P51965 193 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE12JA6NER3 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE1Q13065 139 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE4Q13068 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE5Q13069 117 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 CHAC1Q9BUX1 264 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 KLF12Q9Y4X4 402 aa14.48□□□□□ -0.09
ARHGEF28-203ENST00000426542 PDE6HQ13956 83 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SPINK13Q1W4C9 94 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 LYL1P12980 280 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SDK2Q58EX2 2172 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 TMEM213A2RRL7 107 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 GAGE2AQ6NT46 116 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 TRPM7Q96QT4 1865 aa14.47□□□□□ -0.09
ARHGEF28-203ENST00000426542 SPTA1P02549 2419 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 F5H768 121 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 NDUFB8O95169 186 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 MPDZO75970 2070 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 DNAJC30Q96LL9 226 aa14.46□□□□□ -0.09
ARHGEF28-203ENST00000426542 Q96MF0 132 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 TP53TG1Q9Y2A0 90 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 DAD1P61803 113 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 CEP290O15078 2479 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGHV1-69DA0A0B4J2H0 117 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGHV1-69P01742 117 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 TP53BP1Q12888 1972 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 GATA3P23771 443 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 RTTNQ86VV8 2226 aa14.45□□□□□ -0.1
ARHGEF28-203ENST00000426542 STPG4Q8N801 248 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 G3V318 75 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 CFHR2P36980 270 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 ZNF561-AS1K7EIQ3 104 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 EDA2RQ9HAV5 297 aa14.44□□□□□ -0.1
ARHGEF28-203ENST00000426542 IGKV1-6A0A0C4DH72 117 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 TRIOBPQ9H2D6 2365 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 K7ENP7 123 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 PFN1P07737 140 aaKnown RBP14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 AZU1P20160 251 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 CEACAM8P31997 349 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 TMEM14BQ9NUH8 114 aa14.43□□□□□ -0.1
ARHGEF28-203ENST00000426542 ANK1P16157 1881 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms