RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 CIB3Q96Q77 187 aaPredicted RBP4.5□□□□□ -1.69
NIF3L1-207ENST00000426253 C7orf50Q9BRJ6 194 aaKnown RBP4.5□□□□□ -1.69
NIF3L1-207ENST00000426253 PBDC1Q9BVG4 233 aa4.5□□□□□ -1.69
NIF3L1-207ENST00000426253 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 IGKV1D-37A0A075B6S9 117 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 PLA2G10O15496 165 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 ZNF688P0C7X2 276 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 BTCP35070 178 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 NKX2-1P43699 371 aaPredicted RBP4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 POLR2GP62487 172 aaKnown RBP eCLIP4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 OR2F1Q13607 317 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 OR11H2Q8NH07 326 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 RAB40CQ96S21 281 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 TRGV9Q99603 122 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 RARRES2Q99969 163 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 PSENENQ9NZ42 101 aa4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 STRAPQ9Y3F4 350 aaKnown RBP4.49□□□□□ -1.69
NIF3L1-207ENST00000426253 A0A1W2PPQ1 181 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 KNCNA6PVL3 124 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 H3BP45 60 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 LYRM1O43325 122 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 CFDP00746 253 aaPredicted RBP4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 CA1P00915 261 aaPredicted RBP4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 TCRBP04435 133 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 LYZP61626 148 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 EWSR1Q01844 656 aaKnown RBP eCLIP4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 PSMG4Q5JS54 123 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 ACTL10Q5JWF8 245 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 SIGLEC15Q6ZMC9 328 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 OR4D5Q8NGN0 318 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 PPP1R14BQ96C90 147 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 SMIM8Q96KF7 97 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 NRN1Q9NPD7 142 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 GSKIPQ9P0R6 139 aa4.48□□□□□ -1.69
NIF3L1-207ENST00000426253 DNAH11Q96DT5 4516 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 TRAV6A0A075B6T7 132 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 IGKV1OR2-108A0A075B7D4 117 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 PRSS46E5RG02 174 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 SSSCA1O60232 199 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 INAFM2P0DMQ5 153 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 ORM2P19652 201 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 NUP62P37198 522 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 ID1P41134 155 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 PAX9P55771 341 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 SNRPD3P62318 126 aaKnown RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 PNRC1Q12796 327 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 IAH1Q2TAA2 248 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 C1orf194Q5T5A4 169 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 OR8G2PQ6IF36 304 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 TMEM182Q6ZP80 229 aaPredicted RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 LINC00299Q6ZSB3 139 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 TRPT1Q86TN4 253 aaKnown RBP4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 OR8I2Q8N0Y5 310 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 BPIFCQ8NFQ6 507 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 MITD1Q8WV92 249 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 CCDC32Q9BV29 185 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 C20orf85Q9H1P6 137 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
NIF3L1-207ENST00000426253 FAM240BA0A1B0GVZ2 78 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 SMCO3A2RU48 225 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 PMS2P5A8MQ11 134 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 FAM25EA8MYX2 175 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 CDK2AP2O75956 126 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 IL5P05113 134 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 SPP1P10451 314 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 S100A7P31151 101 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 TAS2R30P59541 319 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 NUTF2P61970 127 aaKnown RBP4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 AKR1C1Q04828 323 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 ZNF846Q147U1 533 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 PRR27Q6MZM9 219 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 CEMP1Q6PRD7 247 aaPredicted RBP4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 OR10P1Q8NGE3 313 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 C11orf45Q8TAV5 145 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 ZNF431Q8TF32 576 aaPredicted RBP4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 S100ZQ8WXG8 99 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 RSG1Q9BU20 258 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 CLEC5AQ9NY25 188 aa4.46□□□□□ -1.7
NIF3L1-207ENST00000426253 C7orf66A4D0T2 115 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 ZNF98A6NK75 572 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 H3BMM0 161 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 L7N2F9 121 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 CCSO14618 274 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 DEFB4AO15263 64 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 TSC22D2O75157 780 aa4.45□□□□□ -1.7
NIF3L1-207ENST00000426253 CCNKO75909 580 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms