RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 CT45A3Q8NHU0 189 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 FLYWCH2Q96CP2 140 aaKnown RBP12.89□□□□□ -0.35
PKP4-205ENST00000426248 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
PKP4-205ENST00000426248 LY96Q9Y6Y9 160 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 TRAV5A0A0B4J249 113 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 C3orf36Q3SXR2 165 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 Q6ZS49 121 aa12.89□□□□□ -0.35
PKP4-205ENST00000426248 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
PKP4-205ENST00000426248 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 SCGB1A1P11684 91 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 AREGP15514 252 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 COL8A1P27658 744 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 IGHV3OR16-8A0A075B7F1 116 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 ATP5J2P56134 94 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 ANXA2RQ3ZCQ2 193 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 GDF5OSQ5U4N7 250 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 C18orf15Q96N68 181 aa12.88□□□□□ -0.35
PKP4-205ENST00000426248 NCBP2LA6PVI3 153 aaKnown RBP12.87□□□□□ -0.35
PKP4-205ENST00000426248 H3BMG7 143 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 PYYP10082 97 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 LCNL1Q6ZST4 164 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
PKP4-205ENST00000426248 HES4Q9HCC6 221 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 S4R3C0 116 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 MTORP42345 2549 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 FOXE3Q13461 319 aa12.87□□□□□ -0.35
PKP4-205ENST00000426248 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
PKP4-205ENST00000426248 NDUFS7O75251 213 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 RPEQ96AT9 228 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 IDI2-AS1Q9NZ38 188 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 RBP4P02753 201 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 B5MCH6 92 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 UFSP1Q6NVU6 142 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 C11orf52Q96A22 123 aa12.86□□□□□ -0.35
PKP4-205ENST00000426248 LINC00473A8K010 186 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 ITLN2Q8WWU7 325 aaPredicted RBP12.85□□□□□ -0.35
PKP4-205ENST00000426248 APOMO95445 188 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 PRSS1P07477 247 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 CCL19Q99731 98 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 JPT1Q9UK76 154 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
PKP4-205ENST00000426248 PCP2Q8IVA1 136 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 ZBTB34Q8NCN2 500 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 GAFA1Q96PS6 74 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 ZNF414Q96IQ9 312 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 ZNF479Q96JC4 524 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 PEX7O00628 323 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 SMAD7O15105 426 aaKnown RBP12.84□□□□□ -0.35
PKP4-205ENST00000426248 DLX1P56177 255 aa12.84□□□□□ -0.35
PKP4-205ENST00000426248 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
PKP4-205ENST00000426248 PGPA6NDG6 321 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 H3BVH4 76 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.83□□□□□ -0.36
PKP4-205ENST00000426248 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 VGLL1Q99990 258 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.36
PKP4-205ENST00000426248 MYOD1P15172 320 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 C2orf91Q6ZV80 131 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 SYT8Q8NBV8 401 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 C1RLQ9NZP8 487 aa12.83□□□□□ -0.36
PKP4-205ENST00000426248 GATA4P43694 442 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 PDPNQ86YL7 162 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 ZNRD1Q9P1U0 126 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 LOC107984156A0A0G2JMH3 177 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 NCR2O95944 276 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 ARL17AQ8IVW1 177 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
PKP4-205ENST00000426248 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
PKP4-205ENST00000426248 SMIM20Q8N5G0 67 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 RPP21Q9H633 154 aaKnown RBP12.81□□□□□ -0.36
PKP4-205ENST00000426248 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 TGFAP01135 160 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 MLANAQ16655 118 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
PKP4-205ENST00000426248 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 LINC00312Q9Y6C7 94 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 ZZEF1O43149 2961 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 A0A1B0GW15 77 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 OR2J3O76001 311 aa12.81□□□□□ -0.36
PKP4-205ENST00000426248 HERV-K104P63124 156 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms