RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 STAG3L2P0CL84 134 aa17.98■□□□□ 0.47
APOE-202ENST00000425718 STAG3L3P0CL85 134 aa17.98■□□□□ 0.47
APOE-202ENST00000425718 PSG9Q00887 426 aa17.98■□□□□ 0.47
APOE-202ENST00000425718 RNF141Q8WVD5 230 aa17.98■□□□□ 0.47
APOE-202ENST00000425718 TMED6Q8WW62 240 aa17.98■□□□□ 0.47
APOE-202ENST00000425718 SOCS3O14543 225 aa17.97■□□□□ 0.47
APOE-202ENST00000425718 CXorf1O96002 111 aa17.97■□□□□ 0.47
APOE-202ENST00000425718 UBE2L3P68036 154 aaKnown RBP17.97■□□□□ 0.47
APOE-202ENST00000425718 MAP6D1Q9H9H5 199 aa17.97■□□□□ 0.47
APOE-202ENST00000425718 NBEAP1P0C6P0 100 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 ZNF688P0C7X2 276 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 ODF3L2Q3SX64 289 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 Q8N1Y9 231 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 TUBA4BQ9H853 241 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 TMEM167BQ9NRX6 74 aa17.96■□□□□ 0.47
APOE-202ENST00000425718 TRBV19A0A075B6N1 114 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 A8MZ25 164 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 PYYP10082 97 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 DEFB131AP59861 70 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 LYPD1Q8N2G4 141 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 AAMDCQ9H7C9 122 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 ZNF331Q9NQX6 463 aaPredicted RBP17.95■□□□□ 0.46
APOE-202ENST00000425718 PRELID1Q9Y255 219 aa17.95■□□□□ 0.46
APOE-202ENST00000425718 TEX46H3BTG2 121 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 PSMG4Q5JS54 123 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 FXYD5Q96DB9 178 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 C19orf73Q9NVV2 129 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 ZNF586Q9NXT0 402 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 UBQLN2Q9UHD9 624 aa17.94■□□□□ 0.46
APOE-202ENST00000425718 H3BQ15 152 aa17.93■□□□□ 0.46
APOE-202ENST00000425718 ARL14EPLP0DKL9 152 aa17.93■□□□□ 0.46
APOE-202ENST00000425718 SULT1A2P50226 295 aa17.93■□□□□ 0.46
APOE-202ENST00000425718 DEFA6Q01524 100 aa17.93■□□□□ 0.46
APOE-202ENST00000425718 SAT2Q96F10 170 aaPredicted RBP17.93■□□□□ 0.46
APOE-202ENST00000425718 LINC00052Q96N35 136 aa17.93■□□□□ 0.46
APOE-202ENST00000425718 BOLA2-SMG1P6H3BVE0 249 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 OR10J4P0C629 311 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 FAM74A1Q5RGS3 127 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 FAM213BQ8TBF2 198 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 MRAPQ8TCY5 172 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 BLNKQ8WV28 456 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 MRPL53Q96EL3 112 aaKnown RBP17.92■□□□□ 0.46
APOE-202ENST00000425718 C17orf77Q96MU5 243 aa17.92■□□□□ 0.46
APOE-202ENST00000425718 MAP1LC3B2A6NCE7 125 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 K7EIL1 84 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 GCHFRP30047 84 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 PSG3Q16557 428 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 FAM24BQ8N5W8 94 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 MAP1LC3BQ9GZQ8 125 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 SRD5A3Q9H8P0 318 aa17.91■□□□□ 0.46
APOE-202ENST00000425718 PRB2P02812 416 aaPredicted RBP17.9■□□□□ 0.46
APOE-202ENST00000425718 IGHV4-30-4P0DP06 118 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 EBLN2Q6P2I7 272 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 FOXI2Q6ZQN5 318 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 STHQ8IWL8 128 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 DEFB125Q8N687 156 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 MBD3L1Q8WWY6 194 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 ZNF503Q96F45 646 aa17.9■□□□□ 0.46
APOE-202ENST00000425718 HMGB3O15347 200 aaKnown RBP17.89■□□□□ 0.45
APOE-202ENST00000425718 HBE1P02100 147 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 H2AFB1P0C5Y9 115 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 ZNF726P1Q15940 193 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 ZNF738Q8NE65 137 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 SUN5Q8TC36 379 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 BOLA1Q9Y3E2 137 aa17.89■□□□□ 0.45
APOE-202ENST00000425718 TRAV8-2A0A0B4J237 113 aa17.88■□□□□ 0.45
APOE-202ENST00000425718 PPT1P50897 306 aa17.88■□□□□ 0.45
APOE-202ENST00000425718 DEFB121Q5J5C9 76 aa17.88■□□□□ 0.45
APOE-202ENST00000425718 IQCF2Q8IXL9 164 aa17.88■□□□□ 0.45
APOE-202ENST00000425718 AGRNO00468 2067 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 SLC17A3O00476 420 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 CSN1S1P47710 185 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 APRG1Q8IVJ8 170 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 ARL6IP6Q8N6S5 226 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 SFT2D1Q8WV19 159 aa17.87■□□□□ 0.45
APOE-202ENST00000425718 NKX6-2Q9C056 277 aaPredicted RBP17.87■□□□□ 0.45
APOE-202ENST00000425718 SAV1Q9H4B6 383 aaPredicted RBP17.87■□□□□ 0.45
APOE-202ENST00000425718 LOC102724200A0A096LPH7 203 aaPredicted RBP17.86■□□□□ 0.45
APOE-202ENST00000425718 H3BTX0 84 aa17.86■□□□□ 0.45
APOE-202ENST00000425718 DUSP14O95147 198 aaKnown RBP17.86■□□□□ 0.45
APOE-202ENST00000425718 NDUFB4O95168 129 aa17.86■□□□□ 0.45
APOE-202ENST00000425718 OTORQ9NRC9 128 aa17.86■□□□□ 0.45
APOE-202ENST00000425718 PLA2G2EQ9NZK7 142 aa17.86■□□□□ 0.45
APOE-202ENST00000425718 ARL2-SNX15V9GYD0 113 aa17.86■□□□□ 0.45
APOE-202ENST00000425718 SNRPCP09234 159 aaKnown RBP17.85■□□□□ 0.45
APOE-202ENST00000425718 HLA-DRB4P13762 266 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 FHITP49789 147 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 BLOC1S1P78537 153 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 SSX7Q7RTT5 188 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 RXFP4Q8TDU9 374 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 CLUHP3Q96NS8 147 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 WFDC10AQ9H1F0 79 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 Q9H3A6 140 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 HLA-DRB4X5D2U9 266 aa17.85■□□□□ 0.45
APOE-202ENST00000425718 TRAV1-1A0A0B4J248 108 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 A0A1W2PRE2 83 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 APOC4P55056 127 aa17.84■□□□□ 0.45
APOE-202ENST00000425718 NUTF2P61970 127 aaKnown RBP17.84■□□□□ 0.45
APOE-202ENST00000425718 RANP62826 216 aaKnown RBP17.84■□□□□ 0.45
APOE-202ENST00000425718 ACTL10Q5JWF8 245 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms