RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 LINC00612Q8N6U2 182 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 PPP1R14DQ9NXH3 145 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 TRAV26-1A0A087WT03 109 aa12.17□□□□□ -0.46
HDAC7-208ENST00000425451 OR5G3P0C626 314 aa12.17□□□□□ -0.46
HDAC7-208ENST00000425451 LINC00869P0C866 280 aa12.17□□□□□ -0.46
HDAC7-208ENST00000425451 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
HDAC7-208ENST00000425451 CDKN1BP46527 198 aa12.17□□□□□ -0.46
HDAC7-208ENST00000425451 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
HDAC7-208ENST00000425451 RPUSD4Q96CM3 377 aaKnown RBP12.17□□□□□ -0.46
HDAC7-208ENST00000425451 Q9H3A6 140 aa12.17□□□□□ -0.46
HDAC7-208ENST00000425451 SMCO3A2RU48 225 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 HOXA5P20719 270 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 OR5I1Q13606 314 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 ESRGQ1W209 222 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 RXFP4Q8TDU9 374 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 GNPNAT1Q96EK6 184 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-208ENST00000425451 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
HDAC7-208ENST00000425451 SLC25A21Q9BQT8 299 aaPredicted RBP12.16□□□□□ -0.46
HDAC7-208ENST00000425451 H7BYZ3 331 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 ZNF701M0R085 212 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-208ENST00000425451 CCNKO75909 580 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 BTF3P20290 206 aaKnown RBP12.15□□□□□ -0.46
HDAC7-208ENST00000425451 M6PRP20645 277 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 TMBIM6P55061 237 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 SELENOTP62341 195 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC7-208ENST00000425451 TOMM5Q8N4H5 51 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 OR10J6PQ8NGY7 276 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 UPK3BQ9BT76 320 aa12.15□□□□□ -0.46
HDAC7-208ENST00000425451 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
HDAC7-208ENST00000425451 A0A0J9YY99 117 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 ADAP1O75689 374 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 BCL7BQ9BQE9 202 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 ARL6Q9H0F7 186 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
HDAC7-208ENST00000425451 PSENENQ9NZ42 101 aa12.14□□□□□ -0.47
HDAC7-208ENST00000425451 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 PRAC2D3DTV9 90 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 K7EPK0 472 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
HDAC7-208ENST00000425451 AP3S2P59780 193 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 ARV1Q9H2C2 271 aa12.13□□□□□ -0.47
HDAC7-208ENST00000425451 CXCL2P19875 107 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 ANXA7P20073 488 aaKnown RBP12.12□□□□□ -0.47
HDAC7-208ENST00000425451 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-208ENST00000425451 DLK1P80370 383 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 PYDC2Q56P42 97 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 ZBTB8BQ8NAP8 495 aaPredicted RBP12.12□□□□□ -0.47
HDAC7-208ENST00000425451 MCFD2Q8NI22 146 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 MRPS16Q9Y3D3 137 aaKnown RBP12.12□□□□□ -0.47
HDAC7-208ENST00000425451 V9GYH0 126 aa12.12□□□□□ -0.47
HDAC7-208ENST00000425451 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 H3BMQ9 156 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 H3BNG1 76 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 GAGE7O76087 117 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
HDAC7-208ENST00000425451 HERC1Q15751 4861 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 FNDC10F2Z333 226 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 SLC17A3O00476 420 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 SSSCA1O60232 199 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 METTL15P1P0C7V9 234 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 SLC38A11Q08AI6 406 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 TEPPQ6URK8 271 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 S100A7AQ86SG5 101 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 CCDC28AQ8IWP9 274 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 DEDD2Q8WXF8 326 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
HDAC7-208ENST00000425451 RLN2P04090 185 aa12.09□□□□□ -0.47
HDAC7-208ENST00000425451 UBE2MP61081 183 aaKnown RBP12.09□□□□□ -0.47
HDAC7-208ENST00000425451 PXDC1Q5TGL8 231 aa12.09□□□□□ -0.47
HDAC7-208ENST00000425451 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
HDAC7-208ENST00000425451 Q6ZRN7 208 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-208ENST00000425451 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
HDAC7-208ENST00000425451 LINC00854A0A1B0GVQ3 168 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 H3BTX0 84 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 CT45A10P0DMU9 189 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 ARL16Q0P5N6 197 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 C4orf46Q504U0 113 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 Q6ZTI0 123 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-208ENST00000425451 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 RNF24Q9Y225 148 aa12.08□□□□□ -0.48
HDAC7-208ENST00000425451 SNURFLB1AK76 121 aa12.07□□□□□ -0.48
HDAC7-208ENST00000425451 H3BQ15 152 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms