RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 F6UZH7 168 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 PDE6DO43924 150 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 ZNF253O75346 499 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
MDC1-205ENST00000425072 APOHP02749 345 aaPredicted RBP7.86□□□□□ -1.15
MDC1-205ENST00000425072 PF4P02776 101 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 OR10J4P0C629 311 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 IGLC2P0DOY2 106 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 PYYP10082 97 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 BCL2P10415 239 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 GP9P14770 177 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
MDC1-205ENST00000425072 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
MDC1-205ENST00000425072 SHISA2Q6UWI4 295 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 SLC7A5P1Q8MH63 180 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 TCEAL7Q9BRU2 100 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 AAMDCQ9H7C9 122 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 TREM1Q9NP99 234 aa7.86□□□□□ -1.15
MDC1-205ENST00000425072 TRBV19A0A075B6N1 114 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 IGHV3OR16-13A0A075B7E8 117 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 A0A087X0K7 114 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 IGHV3-49A0A0A0MS15 119 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 IGHV3-74A0A0B4J1X5 117 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 IGHV3-66A0A0C4DH42 116 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 LOC102723971A0A1B0GUV8 181 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 TMEM213A2RRL7 107 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 PGPA6NDG6 321 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 MRPS12O15235 138 aaKnown RBP7.85□□□□□ -1.15
MDC1-205ENST00000425072 CSN3P07498 182 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 UBE2G2P60604 165 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 MEF2BQ02080 365 aaPredicted RBP7.85□□□□□ -1.15
MDC1-205ENST00000425072 TOR2AQ5JU69 321 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 ARL6IP6Q8N6S5 226 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 RXFP4Q8TDU9 374 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 GLMPQ8WWB7 406 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 RARRES2Q99969 163 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 SLC50A1Q9BRV3 221 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 OTORQ9NRC9 128 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 ZNF586Q9NXT0 402 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
MDC1-205ENST00000425072 TRAV25A0A0B4J276 109 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 C11orf94C9JXX5 98 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 H3BQ15 152 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 ID1P41134 155 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 CSN1S1P47710 185 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 ICAM4Q14773 271 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 RBPMS2Q6ZRY4 209 aaKnown RBP7.84□□□□□ -1.15
MDC1-205ENST00000425072 CMTM2Q8TAZ6 248 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 RPUSD4Q96CM3 377 aaKnown RBP7.84□□□□□ -1.15
MDC1-205ENST00000425072 CITED4Q96RK1 184 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 SLC35B3Q9H1N7 401 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 MLXQ9UH92 298 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 SMAD5-AS1Q9Y6J3 95 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 PKD1L1Q8TDX9 2849 aa7.84□□□□□ -1.15
MDC1-205ENST00000425072 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 DNASE2O00115 360 aaPredicted RBP7.83□□□□□ -1.16
MDC1-205ENST00000425072 S100A9P06702 114 aaKnown RBP7.83□□□□□ -1.16
MDC1-205ENST00000425072 CMC4P56277 68 aaPredicted RBP7.83□□□□□ -1.16
MDC1-205ENST00000425072 DYNLRB2Q8TF09 96 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 HIST1H2BAQ96A08 127 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 MCRIP2Q9BUT9 160 aaKnown RBP7.83□□□□□ -1.16
MDC1-205ENST00000425072 Q9H3A6 140 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 NOTCH1P46531 2555 aa7.83□□□□□ -1.16
MDC1-205ENST00000425072 TRAV2A0A0B4J234 112 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 KRBOX1C9JBD0 128 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 K7EQM0 130 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 ISLRO14498 428 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 NDUFB4O95168 129 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 SRP19P09132 144 aaKnown RBP7.82□□□□□ -1.16
MDC1-205ENST00000425072 INSL3P51460 131 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 CD81P60033 236 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 DEFB114Q30KQ6 69 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 FAM74A3Q4VXF1 159 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 SOHLH1Q5JUK2 328 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 FAM90A2PQ658T7 463 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 HIST2H2BDQ6DRA6 164 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 CCDC28AQ8IWP9 274 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 ZNF331Q9NQX6 463 aaPredicted RBP7.82□□□□□ -1.16
MDC1-205ENST00000425072 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
MDC1-205ENST00000425072 YTHDF2Q9Y5A9 579 aaKnown RBP7.82□□□□□ -1.16
MDC1-205ENST00000425072 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
MDC1-205ENST00000425072 TMEM218A2RU14 115 aa7.81□□□□□ -1.16
MDC1-205ENST00000425072 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
MDC1-205ENST00000425072 SLC25A5P05141 298 aaKnown RBP7.81□□□□□ -1.16
MDC1-205ENST00000425072 SNRPCP09234 159 aaKnown RBP7.81□□□□□ -1.16
MDC1-205ENST00000425072 OR2K2Q8NGT1 345 aa7.81□□□□□ -1.16
MDC1-205ENST00000425072 MRPL53Q96EL3 112 aaKnown RBP7.81□□□□□ -1.16
MDC1-205ENST00000425072 H3BTX0 84 aa7.8□□□□□ -1.16
MDC1-205ENST00000425072 TSPAN4O14817 238 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms