RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 WFDC10AQ9H1F0 79 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 SH3BGRL3Q9H299 93 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 CACYBPQ9HB71 228 aaKnown RBP0.66□□□□□ -2.3
LINC00397-201ENST00000422074 SS18L2Q9UHA2 77 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 EML5Q05BV3 1969 aa0.66□□□□□ -2.3
LINC00397-201ENST00000422074 MGAMO43451 1857 aa0.65□□□□□ -2.3
LINC00397-201ENST00000422074 PLXNA4Q9HCM2 1894 aa0.65□□□□□ -2.3
LINC00397-201ENST00000422074 MYO5AQ9Y4I1 1855 aaKnown RBP0.65□□□□□ -2.3
LINC00397-201ENST00000422074 KIAA1549Q9HCM3 1950 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 hDV103S1A0JD37 113 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 JMJD7-PLA2G4BH0Y9G9 81 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 RER1O15258 196 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 LYRM1O43325 122 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 INSL3P51460 131 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 CIRBPQ14011 172 aaKnown RBP0.65□□□□□ -2.31
LINC00397-201ENST00000422074 TMEM14EPQ6UXP3 125 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 GRINAQ7Z429 371 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 OR10AC1Q8NH08 325 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 OR10AG1Q8NH19 301 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 NEK7Q8TDX7 302 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 TCEAL2Q9H3H9 227 aaPredicted RBP0.65□□□□□ -2.31
LINC00397-201ENST00000422074 HSPB8Q9UJY1 196 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 N4BP2Q86UW6 1770 aaPredicted RBP0.65□□□□□ -2.31
LINC00397-201ENST00000422074 CASP8AP2Q9UKL3 1982 aa0.65□□□□□ -2.31
LINC00397-201ENST00000422074 CD109Q6YHK3 1445 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 TRPM1Q7Z4N2 1603 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 TRAV23DV6A0A075B6W5 121 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 A0A087WSZ3 146 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 A0A096LPI6 279 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 ODAMA1E959 279 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 IGLV1-51P01701 117 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 HOXA6P31267 233 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 EIF3IQ13347 325 aaKnown RBP0.64□□□□□ -2.31
LINC00397-201ENST00000422074 POU6F1Q14863 301 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 SPATA45Q537H7 98 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 AP3S1Q92572 193 aa0.64□□□□□ -2.31
LINC00397-201ENST00000422074 GPX7Q96SL4 187 aaPredicted RBP0.64□□□□□ -2.31
LINC00397-201ENST00000422074 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
LINC00397-201ENST00000422074 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
LINC00397-201ENST00000422074 TRAV5A0A0B4J249 113 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 C9orf170A2RU37 121 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 GPR31O00270 319 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 TCTAP57738 103 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 GNG3P63215 75 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 MSMO1Q15800 293 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 KRTAP26-1Q6PEX3 210 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 ZC2HC1AQ96GY0 325 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 CCDC94Q9BW85 323 aaPredicted RBP0.63□□□□□ -2.31
LINC00397-201ENST00000422074 COL24A1Q17RW2 1714 aa0.63□□□□□ -2.31
LINC00397-201ENST00000422074 EIF3AQ14152 1382 aaKnown RBP0.62□□□□□ -2.31
LINC00397-201ENST00000422074 C5orf67F2Z3F1 127 aa0.62□□□□□ -2.31
LINC00397-201ENST00000422074 CST7O76096 145 aa0.62□□□□□ -2.31
LINC00397-201ENST00000422074 MT-ND6P03923 174 aa0.62□□□□□ -2.31
LINC00397-201ENST00000422074 RPL35P42766 123 aaKnown RBP0.62□□□□□ -2.31
LINC00397-201ENST00000422074 TAS2R41P59536 307 aa0.62□□□□□ -2.31
LINC00397-201ENST00000422074 DOCK4Q8N1I0 1966 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 NISCHQ9Y2I1 1504 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 IDO1P14902 403 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 HBBP68871 147 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 VMA21Q3ZAQ7 101 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 C1orf140Q5VVS0 124 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 SMIM20Q8N5G0 67 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 CDC26Q8NHZ8 85 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 RTL8AQ9BWD3 113 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 ERBINQ96RT1 1412 aa0.61□□□□□ -2.31
LINC00397-201ENST00000422074 ADGBQ8N7X0 1667 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 MFSD11O43934 449 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 CSN2P05814 226 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 RTL8BQ17RB0 113 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 FKBP1CQ5VVH2 108 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 STX19Q8N4C7 294 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 FAM216BQ8N7L0 139 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 NUP35Q8NFH5 326 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 OR2H1Q9GZK4 316 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 NIT2Q9NQR4 276 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 MED11Q9P086 117 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 RNF11Q9Y3C5 154 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 PTPRFP10586 1907 aa0.6□□□□□ -2.31
LINC00397-201ENST00000422074 RFX7Q2KHR2 1363 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 FRMPD1Q5SYB0 1578 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 YTHDC2Q9H6S0 1430 aaKnown RBP0.59□□□□□ -2.31
LINC00397-201ENST00000422074 NUPR2A6NF83 97 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 H3BQV1 296 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 FAM24BQ8N5W8 94 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 DYDC1Q8WWB3 177 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 PLEKHB2Q96CS7 222 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 BORCS8Q96FH0 119 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 PRRT1Q99946 306 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 BIN3Q9NQY0 253 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 GID8Q9NWU2 228 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 LAMTOR3Q9UHA4 124 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 BOKQ9UMX3 212 aaPredicted RBP0.59□□□□□ -2.31
LINC00397-201ENST00000422074 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
LINC00397-201ENST00000422074 CNTRLQ7Z7A1 2325 aa0.59□□□□□ -2.32
LINC00397-201ENST00000422074 SYNMO15061 1565 aa0.58□□□□□ -2.32
LINC00397-201ENST00000422074 C5orf58C9J3I9 102 aa0.58□□□□□ -2.32
LINC00397-201ENST00000422074 CD14P08571 375 aa0.58□□□□□ -2.32
LINC00397-201ENST00000422074 SERPINB1P30740 379 aa0.58□□□□□ -2.32
LINC00397-201ENST00000422074 GLRXP35754 106 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms