RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
TMEM53-206ENST00000420706 TMEM167BQ9NRX6 74 aa9.38□□□□□ -0.91
TMEM53-206ENST00000420706 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
TMEM53-206ENST00000420706 RGS13O14921 159 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 NMBP08949 121 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 MEOX2P50222 304 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
TMEM53-206ENST00000420706 PAFAH1B2P68402 229 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 GUK1Q16774 197 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 BLNKQ8WV28 456 aa9.37□□□□□ -0.91
TMEM53-206ENST00000420706 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 K7EQG2 157 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 SOCS3O14543 225 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 NDUFB4O95168 129 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 TFPI2P48307 235 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 PSMB3P49720 205 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
TMEM53-206ENST00000420706 GPR61Q9BZJ8 451 aa9.36□□□□□ -0.91
TMEM53-206ENST00000420706 TRAV8-2A0A0B4J237 113 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 SLC17A3O00476 420 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 ZNF253O75346 499 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 RAB14P61106 215 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 ANK2Q01484 3957 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 PDE6HQ13956 83 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 GUCA2BQ16661 112 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 CLLU1Q5K131 121 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 LCN12Q6JVE5 192 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 C16orf92Q96LL3 132 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
TMEM53-206ENST00000420706 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
TMEM53-206ENST00000420706 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
TMEM53-206ENST00000420706 TRRAPQ9Y4A5 3859 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 PPT1P50897 306 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
TMEM53-206ENST00000420706 PSG9Q00887 426 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 FAM24BQ8N5W8 94 aa9.34□□□□□ -0.91
TMEM53-206ENST00000420706 A0A1W2PRE2 83 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 PGPA6NDG6 321 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 FAM74A7A6NL05 159 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 ISLRO14498 428 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 PAGE4O60829 102 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 ID1P41134 155 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 UBE2G2P60604 165 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 C20orf173Q96LM9 149 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 Q9H3A6 140 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 YTHDF2Q9Y5A9 579 aaKnown RBP9.33□□□□□ -0.92
TMEM53-206ENST00000420706 CMYA5Q8N3K9 4069 aa9.33□□□□□ -0.92
TMEM53-206ENST00000420706 G3V4G9 280 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 SUMO1P63165 101 aaKnown RBP9.32□□□□□ -0.92
TMEM53-206ENST00000420706 ICAM4Q14773 271 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 PSG3Q16557 428 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 LINC00052Q96N35 136 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 CLEC5AQ9NY25 188 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 ARL2-SNX15V9GYD0 113 aa9.32□□□□□ -0.92
TMEM53-206ENST00000420706 ZNF688P0C7X2 276 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
TMEM53-206ENST00000420706 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
TMEM53-206ENST00000420706 RBFOX3A6NFN3 312 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 ZNF705FA8MVS1 300 aaPredicted RBP9.3□□□□□ -0.92
TMEM53-206ENST00000420706 GGTLC3B5MD39 225 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 M0R3E3 92 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 IFNA1P01562 189 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 CD7P09564 240 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 ATP5G3P48201 142 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 DEFB131AP59861 70 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
TMEM53-206ENST00000420706 HAGHQ16775 308 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 CST9LP1Q5W188 147 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 RARRES2Q99969 163 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 NKX6-2Q9C056 277 aaPredicted RBP9.3□□□□□ -0.92
TMEM53-206ENST00000420706 MAP6D1Q9H9H5 199 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 C19orf73Q9NVV2 129 aa9.3□□□□□ -0.92
TMEM53-206ENST00000420706 LOC102723971A0A1B0GUV8 181 aa9.29□□□□□ -0.92
TMEM53-206ENST00000420706 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
TMEM53-206ENST00000420706 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
TMEM53-206ENST00000420706 BCL2P10415 239 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms