RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EIF3GO75821 320 aaKnown RBP eCLIP6.37□□□□□ -1.39
TRIM48-201ENST00000417545 HBE1P02100 147 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF688P0C7X2 276 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 ARL14EPLP0DKL9 152 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 HIST1H1EP10412 219 aaKnown RBP6.37□□□□□ -1.39
TRIM48-201ENST00000417545 SULT1A2P50226 295 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 PSG9Q00887 426 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 FAM74A1Q5RGS3 127 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 SAMD5Q5TGI4 173 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 RPP25LQ8N5L8 163 aaKnown RBP6.37□□□□□ -1.39
TRIM48-201ENST00000417545 SFT2D1Q8WV19 159 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 PRR25Q96S07 402 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 TMEM167BQ9NRX6 74 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
TRIM48-201ENST00000417545 A0A087X0K7 114 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 ISLRO14498 428 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 NBEAP1P0C6P0 100 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 STAG3L2P0CL84 134 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 STAG3L3P0CL85 134 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 PSMB3P49720 205 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 FGF8P55075 233 aaPredicted RBP6.36□□□□□ -1.39
TRIM48-201ENST00000417545 BLOC1S1P78537 153 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 FAM90A2PQ658T7 463 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF738Q8NE65 137 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 HRH4Q9H3N8 390 aa6.36□□□□□ -1.39
TRIM48-201ENST00000417545 K7EQG2 157 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 IFNA1P01562 189 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 GCHFRP30047 84 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 CSN1S1P47710 185 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 FHITP49789 147 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 PPT1P50897 306 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 RAB14P61106 215 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 PDE6HQ13956 83 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 CMTM2Q8TAZ6 248 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 FAM167A-AS1Q96KT0 104 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 TUBA4BQ9H853 241 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 CLEC5AQ9NY25 188 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
TRIM48-201ENST00000417545 TRBV19A0A075B6N1 114 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 IGLC2P0DOY2 106 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 DEFB131AP59861 70 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 UBE2G2P60604 165 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 RANP62826 216 aaKnown RBP6.34□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 XP32Q5T750 250 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 EBLN2Q6P2I7 272 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 TEX261Q6UWH6 196 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 SSX7Q7RTT5 188 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 FXYD5Q96DB9 178 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 FAM210AQ96ND0 272 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 MAP6D1Q9H9H5 199 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 PPP1R14DQ9NXH3 145 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 ZNF586Q9NXT0 402 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 PRELID1Q9Y255 219 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 SMAD5-AS1Q9Y6J3 95 aa6.34□□□□□ -1.39
TRIM48-201ENST00000417545 H3BQ15 152 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 SLC17A3O00476 420 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF253O75346 499 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 SLC25A5P05141 298 aaKnown RBP6.33□□□□□ -1.4
TRIM48-201ENST00000417545 CD7P09564 240 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 EGFEM1PQ0D2K5 195 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 ICAM4Q14773 271 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 BEAN1Q3B7T3 259 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 DEFB121Q5J5C9 76 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 CST9LP1Q5W188 147 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 IGFL4Q6B9Z1 124 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 STHQ8IWL8 128 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 SAT2Q96F10 170 aaPredicted RBP6.33□□□□□ -1.4
TRIM48-201ENST00000417545 C17orf77Q96MU5 243 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 Q9H3A6 140 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 SRD5A3Q9H8P0 318 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF331Q9NQX6 463 aaPredicted RBP6.33□□□□□ -1.4
TRIM48-201ENST00000417545 K7EQM0 130 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 MRPS12O15235 138 aaKnown RBP6.33□□□□□ -1.4
TRIM48-201ENST00000417545 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 PSG3Q16557 428 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF767PQ75MW2 155 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 LYPD1Q8N2G4 141 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 EXOC3-AS1Q8N2X6 119 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 FAM24BQ8N5W8 94 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF680Q8NEM1 530 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 MBD3L1Q8WWY6 194 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 MANBALQ9NQG1 85 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 OTORQ9NRC9 128 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 GNG13Q9P2W3 67 aa6.33□□□□□ -1.4
TRIM48-201ENST00000417545 PGPA6NDG6 321 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 F6UZH7 168 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 DUSP14O95147 198 aaKnown RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 PRB2P02812 416 aaPredicted RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 HLA-DMBP28068 263 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms