RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 LINC00052Q96N35 136 aa12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 SLC25A2Q9BXI2 301 aa12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 ZNF331Q9NQX6 463 aaPredicted RBP12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 CYTL1Q9NRR1 136 aa12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 RPRMQ9NS64 109 aa12.9□□□□□ -0.34
COMMD3-BMI1-201ENST00000417470 H3BMM0 161 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 H3BQ15 152 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 MBP02144 154 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 HIST1H1EP10412 219 aaKnown RBP12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RHOBP62745 196 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 C20orf173Q96LM9 149 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 TP53TG1Q9Y2A0 90 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 NBEAL2Q6ZNJ1 2754 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 SPP1P10451 314 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PDE6HQ13956 83 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 TMEM41BQ5BJD5 291 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 MORN3Q6PF18 240 aaPredicted RBP12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 LRRC20Q8TCA0 184 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 ARPC5LQ9BPX5 153 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 ZNF586Q9NXT0 402 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 U3KQK5 164 aa12.88□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 C1QBP02746 253 aa12.87□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 TAS2R45P59539 299 aa12.87□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PSG3Q16557 428 aa12.87□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 A0A0J9YX75 114 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 A8MTW9 85 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 AKAP14Q86UN6 197 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RCHY1Q96PM5 261 aa12.86□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 hCG_2014768A0A024R1R8 64 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 A0A1W2PPV4 95 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PYYP10082 97 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RAB2AP61019 212 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 NUTF2P61970 127 aaKnown RBP12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 GDF5OSQ5U4N7 250 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RPP25LQ8N5L8 163 aaKnown RBP12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 HYLS1Q96M11 299 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PAXXQ9BUH6 204 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 SH3BGRL3Q9H299 93 aa12.85□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 SLC17A3O00476 420 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 BCL2L11O43521 198 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 NDUFB4O95168 129 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PSG9Q00887 426 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 RNF183Q96D59 192 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 FXYD5Q96DB9 178 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 AGRNO00468 2067 aa12.84□□□□□ -0.35
COMMD3-BMI1-201ENST00000417470 KANTRA0A1W2PQU2 76 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 DUSP14O95147 198 aaKnown RBP12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 DEFB1P60022 68 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 TMUB2Q71RG4 321 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 PRELID1Q9Y255 219 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 TENM3Q9P273 2699 aa12.83□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 A0A1B0GVG6 124 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 F6UB75 175 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 SPRY2O43597 315 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 OR7C2O60412 319 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 STAG3L3P0CL85 134 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 EIF5AP63241 154 aaKnown RBP12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 LGALSLQ3ZCW2 172 aaPredicted RBP12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 FAM122CQ6P4D5 195 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 RPUSD4Q96CM3 377 aaKnown RBP12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 STAB2Q8WWQ8 2551 aa12.82□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 H3BTX0 84 aa12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 CA1P00915 261 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 OR8A1Q8NGG7 326 aa12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 ACTR3CQ9C0K3 210 aaPredicted RBP12.81□□□□□ -0.36
COMMD3-BMI1-201ENST00000417470 CNN1P51911 297 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms