RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 H3BUA1 57 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 HAX1O00165 279 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 IGHG4P01861 327 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 CTRLP40313 264 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 SUMO1P63165 101 aaKnown RBP11.33□□□□□ -0.6
SGCE-202ENST00000415788 OR5I1Q13606 314 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 OR4X2Q8NGF9 303 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
SGCE-202ENST00000415788 WIPF2Q8TF74 440 aaPredicted RBP11.33□□□□□ -0.6
SGCE-202ENST00000415788 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 MGST2Q99735 147 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 ENY2Q9NPA8 101 aa11.33□□□□□ -0.6
SGCE-202ENST00000415788 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
SGCE-202ENST00000415788 BRI3O95415 125 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 ELANEP08246 267 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 OR5G3P0C626 314 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 ERHP84090 104 aaKnown RBP11.32□□□□□ -0.6
SGCE-202ENST00000415788 FOXE3Q13461 319 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 TNCP24821 2201 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 K7EN84 100 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 ZNF253O75346 499 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 IGLV1-40P01703 118 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 CRYGCP07315 174 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 WFDC12Q8WWY7 111 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
SGCE-202ENST00000415788 YTHDF2Q9Y5A9 579 aaKnown RBP11.32□□□□□ -0.6
SGCE-202ENST00000415788 APELAP0DMC3 54 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 CD33P20138 364 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 WT1-ASQ06250 92 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 RAB31Q13636 194 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 BATFQ16520 125 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 MIC13Q5XKP0 118 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 C19orf35Q6ZS72 473 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 Q8N976 141 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
SGCE-202ENST00000415788 OSTCQ9NRP0 149 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
SGCE-202ENST00000415788 V9GYV3 84 aa11.31□□□□□ -0.6
SGCE-202ENST00000415788 SLC17A3O00476 420 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 PSMB8P28062 276 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 KRTDAPP60985 99 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 SPATA45Q537H7 98 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 ORAOV1Q8WV07 137 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 GNB4Q9HAV0 340 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 PLXNB1O43157 2135 aa11.3□□□□□ -0.6
SGCE-202ENST00000415788 FNDC10F2Z333 226 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 C12orf54Q6X4T0 127 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 ZNF355PQ9NSJ1 428 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 PF4V1P10720 104 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 AMTP48728 403 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
SGCE-202ENST00000415788 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 DNAJC4Q9NNZ3 241 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 F11RQ9Y624 299 aaKnown RBP11.29□□□□□ -0.6
SGCE-202ENST00000415788 NF1P21359 2839 aa11.29□□□□□ -0.6
SGCE-202ENST00000415788 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 PCP4P48539 62 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 GNG4P50150 75 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 RAB9AP51151 201 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 HNRNPA3P51991 378 aaKnown RBP11.28□□□□□ -0.6
SGCE-202ENST00000415788 ATP5IP56385 69 aaPredicted RBP11.28□□□□□ -0.6
SGCE-202ENST00000415788 KLK9Q2XQG4 91 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 C10orf99Q6UWK7 81 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 TMEM136Q6ZRR5 245 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 THYN1Q9P016 225 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 KLK9Q9UKQ9 250 aa11.28□□□□□ -0.6
SGCE-202ENST00000415788 C20orf202A1L168 122 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 HELTA6NFD8 242 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 F2Z2F3 143 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.6
SGCE-202ENST00000415788 TXN2Q99757 166 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 ZNF747Q9BV97 191 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 LAMTOR2Q9Y2Q5 125 aa11.27□□□□□ -0.6
SGCE-202ENST00000415788 A0A1W2PS18 150 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 ISLRO14498 428 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 TRGV3P03979 118 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 TIGITQ495A1 244 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 SLC24A4Q8NFF2 622 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms