RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CARHSP1Q9Y2V2 147 aaKnown RBP10.89□□□□□ -0.67
HMGA1P1-201ENST00000415560 HIVEP1P15822 2718 aa10.89□□□□□ -0.67
HMGA1P1-201ENST00000415560 ANK3Q12955 4377 aaKnown RBP10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 CCL24O00175 119 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 CHEK1O14757 476 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 S100A9P06702 114 aaKnown RBP10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 CSN1S1P47710 185 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 SLURP1P55000 103 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 GLMPQ8WWB7 406 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 NIPSNAP3BQ9BS92 247 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 EPDR1Q9UM22 224 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
HMGA1P1-201ENST00000415560 H3BTX0 84 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 K7EQM0 130 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 NDUFB4O95168 129 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 SNAPINO95295 136 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 MYCNOSP40205 109 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 RPL11P62913 178 aaKnown RBP10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 ZNF674Q2M3X9 581 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 FAM90A2PQ658T7 463 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 C11orf52Q96A22 123 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 SMIM7Q9BQ49 75 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
HMGA1P1-201ENST00000415560 SCO2A0A1W2PP80 73 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 GGTLC3B5MD39 225 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 CBLN1P23435 193 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 AKR1C3P42330 323 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 CNN1P51911 297 aaKnown RBP10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 TMEM241Q24JQ0 296 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 OR9G4Q8NGQ1 327 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 C17orf77Q96MU5 243 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 PARLQ9H300 379 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
HMGA1P1-201ENST00000415560 SERTM2A0A1B0GWG4 89 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 C2orf70A6NJV1 201 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 PEX7O00628 323 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 TAS2R60P59551 318 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 PNRC1Q12796 327 aaPredicted RBP10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 ZNF331Q9NQX6 463 aaPredicted RBP10.85□□□□□ -0.67
HMGA1P1-201ENST00000415560 M0R036 132 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 FOLR2P14207 255 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 ID1P41134 155 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 UBE2G1P62253 170 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 FHL3Q13643 280 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 C16orf92Q96LL3 132 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 DUX3Q96PT4 197 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 ATG101Q9BSB4 218 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 RPH3ALQ9UNE2 315 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 MAST4O15021 2626 aa10.84□□□□□ -0.67
HMGA1P1-201ENST00000415560 FN1P02751 2386 aaKnown RBP10.83□□□□□ -0.68
HMGA1P1-201ENST00000415560 OVOL1O14753 267 aa10.83□□□□□ -0.68
HMGA1P1-201ENST00000415560 TCRAP04437 139 aa10.83□□□□□ -0.68
HMGA1P1-201ENST00000415560 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
HMGA1P1-201ENST00000415560 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 B4DEV8 164 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 C9JCJ5 164 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 DNASE2O00115 360 aaPredicted RBP10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 SLC17A3O00476 420 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 GNG4P50150 75 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 GUCA2BQ16661 112 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 AWAT1Q58HT5 328 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 C2CD4CQ8TF44 421 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 MRPL53Q96EL3 112 aaKnown RBP10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 MLXQ9UH92 298 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 LY96Q9Y6Y9 160 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 F8P00451 2351 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 MTORP42345 2549 aa10.82□□□□□ -0.68
HMGA1P1-201ENST00000415560 DIRC3C9JPN6 131 aa10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 PF4P02776 101 aa10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 KRTAP10-3P60369 221 aa10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 GNG5P63218 68 aa10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
HMGA1P1-201ENST00000415560 ISLRO14498 428 aa10.8□□□□□ -0.68
HMGA1P1-201ENST00000415560 CSN3P07498 182 aa10.8□□□□□ -0.68
HMGA1P1-201ENST00000415560 RHEBQ15382 184 aa10.8□□□□□ -0.68
HMGA1P1-201ENST00000415560 PSG3Q16557 428 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms