RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SRSF1Q07955 248 aaKnown RBP eCLIP6.33□□□□□ -1.4
SIK3-203ENST00000415541 TAL2Q16559 108 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 Q6AWC8 147 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 CEND1Q8N111 149 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 LEAP2Q969E1 77 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 A0A0G2JNJ9 132 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 FAM90A9PA6NNJ1 464 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 K7ERJ3 54 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 PEX7O00628 323 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 IGLV2-14P01704 120 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 ID1P41134 155 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 XGP55808 180 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 MRPL32Q9BYC8 188 aaKnown RBP6.33□□□□□ -1.4
SIK3-203ENST00000415541 TMEM126AQ9H061 195 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 Q9UFV3 132 aa6.33□□□□□ -1.4
SIK3-203ENST00000415541 GGTLC3B5MD39 225 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 IFITM1P13164 125 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 INSL3P51460 131 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 C20orf204Q6ZNR8 217 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 MBD3L4A6NDZ8 208 aaPredicted RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 MBD3L3A6NE82 208 aaPredicted RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 MBD3L5A6NJ08 208 aaPredicted RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 C17orf98A8MV24 154 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 NPIPB6E9PJ23 425 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 MGST3O14880 152 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 FCN3O75636 299 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 FCER1GP30273 86 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 FOXE3Q13461 319 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 MBD3L2Q8NHZ7 208 aaPredicted RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 S1PR3Q99500 378 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 LSM4Q9Y4Z0 139 aaKnown RBP6.32□□□□□ -1.4
SIK3-203ENST00000415541 RRN3P1Q2M238 152 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 AMTNQ6UX39 209 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 IGFL3Q6UXB1 125 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 Q6ZR03 302 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 PCP2Q8IVA1 136 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 FAM215AQ9Y5M1 114 aa6.32□□□□□ -1.4
SIK3-203ENST00000415541 OOEPA6NGQ2 149 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 IQCF6A8MYZ5 107 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
SIK3-203ENST00000415541 UBTD1Q9HAC8 227 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 NOTCH3Q9UM47 2321 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 TRAV24A0A0B4J272 114 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 NCR2O95944 276 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 IL4P05112 153 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 SLC25A5P05141 298 aaKnown RBP6.31□□□□□ -1.4
SIK3-203ENST00000415541 COX7A1P24310 79 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
SIK3-203ENST00000415541 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 FAM169BQ8N8A8 192 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 FREM2Q5SZK8 3169 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 NPIPB5A8MRT5 1133 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 FNDC10F2Z333 226 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 BRI3O95415 125 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 ZNF688P0C7X2 276 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 CFHR2P36980 270 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 HES1Q14469 280 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 IFI27L1Q96BM0 104 aa6.31□□□□□ -1.4
SIK3-203ENST00000415541 HBDP02042 147 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 PRR20EP86478 221 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 PRR20CP86479 221 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 PRR20DP86480 221 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 PRR20BP86481 221 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 PRR20AP86496 221 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 ABHD12Q8N2K0 398 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 DDB2Q92466 427 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.3□□□□□ -1.4
SIK3-203ENST00000415541 IGFL2Q6UWQ7 119 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 CITED2Q99967 270 aaPredicted RBP6.3□□□□□ -1.4
SIK3-203ENST00000415541 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 CENPVL3A0A0U1RRI6 287 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 SHISA9B4DS77 424 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 LYNX1G3V0Z9 82 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 HAX1O00165 279 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 RHODO00212 210 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 LYNX1P0DP58 116 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 DAZAP2Q15038 168 aaPredicted RBP6.3□□□□□ -1.4
SIK3-203ENST00000415541 FAM216BQ8N7L0 139 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 OR5AN1Q8NGI8 311 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 Q8TCH9 128 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 SRSF8Q9BRL6 282 aaKnown RBP6.3□□□□□ -1.4
SIK3-203ENST00000415541 LRRK2Q5S007 2527 aa6.3□□□□□ -1.4
SIK3-203ENST00000415541 CD24P25063 80 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 PIFOQ8TCI5 191 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
SIK3-203ENST00000415541 PTH2Q96A98 100 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 ONECUT1Q9UBC0 465 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 VPREB3Q9UKI3 123 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 A0A1B0GUT8 65 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 C12orf77C9JDV5 145 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 IGKV3-15P01624 115 aa6.29□□□□□ -1.4
SIK3-203ENST00000415541 PPIFP30405 207 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms