RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 RPUSD4Q96CM3 377 aaKnown RBP13.49□□□□□ -0.25
UBXN4-202ENST00000415164 PSENENQ9NZ42 101 aa13.49□□□□□ -0.25
UBXN4-202ENST00000415164 POLR2GP62487 172 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBXN4-202ENST00000415164 DLK1P80370 383 aa13.48□□□□□ -0.25
UBXN4-202ENST00000415164 GNPNAT1Q96EK6 184 aaPredicted RBP13.48□□□□□ -0.25
UBXN4-202ENST00000415164 ARL6Q9H0F7 186 aa13.48□□□□□ -0.25
UBXN4-202ENST00000415164 Q9H8V8 135 aa13.48□□□□□ -0.25
UBXN4-202ENST00000415164 TRAV26-1A0A087WT03 109 aa13.47□□□□□ -0.25
UBXN4-202ENST00000415164 J3KRW8 73 aa13.47□□□□□ -0.25
UBXN4-202ENST00000415164 SSSCA1O60232 199 aa13.47□□□□□ -0.25
UBXN4-202ENST00000415164 CDKN1BP46527 198 aa13.47□□□□□ -0.25
UBXN4-202ENST00000415164 OR10J6PQ8NGY7 276 aa13.47□□□□□ -0.25
UBXN4-202ENST00000415164 PARD6GQ9BYG4 376 aaPredicted RBP13.47□□□□□ -0.25
UBXN4-202ENST00000415164 ADAP1O75689 374 aa13.46□□□□□ -0.25
UBXN4-202ENST00000415164 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
UBXN4-202ENST00000415164 CCDC190Q86UF4 302 aa13.46□□□□□ -0.25
UBXN4-202ENST00000415164 TMEM263Q8WUH6 116 aaKnown RBP13.46□□□□□ -0.25
UBXN4-202ENST00000415164 SOSTQ9BQB4 213 aa13.46□□□□□ -0.25
UBXN4-202ENST00000415164 SLIRPQ9GZT3 109 aaKnown RBP13.46□□□□□ -0.25
UBXN4-202ENST00000415164 SCRT2Q9NQ03 307 aa13.46□□□□□ -0.25
UBXN4-202ENST00000415164 A0A087X0K7 114 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 GAGE12BA1L429 117 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 H7BYZ3 331 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 CCNKO75909 580 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 GAGE7O76087 117 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 SCGB1D2O95969 90 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 TMBIM6P55061 237 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 SLC38A11Q08AI6 406 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 TTC32Q5I0X7 151 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 ZNF493Q6ZR52 646 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 CCDC28AQ8IWP9 274 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
UBXN4-202ENST00000415164 SLC25A21Q9BQT8 299 aaPredicted RBP13.45□□□□□ -0.26
UBXN4-202ENST00000415164 PMS2P5A8MQ11 134 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 H3BTX0 84 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 SELENOTP62341 195 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 KIR3DS1Q14943 382 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 Q8N1X5 172 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 RNASE8Q8TDE3 154 aaKnown RBP13.44□□□□□ -0.26
UBXN4-202ENST00000415164 ARV1Q9H2C2 271 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 MGAT4CQ9UBM8 478 aa13.44□□□□□ -0.26
UBXN4-202ENST00000415164 RLN2P04090 185 aa13.43□□□□□ -0.26
UBXN4-202ENST00000415164 METTL15P1P0C7V9 234 aa13.43□□□□□ -0.26
UBXN4-202ENST00000415164 M6PRP20645 277 aa13.43□□□□□ -0.26
UBXN4-202ENST00000415164 KRTAP1-5Q9BYS1 174 aa13.43□□□□□ -0.26
UBXN4-202ENST00000415164 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 H3BMQ9 156 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
UBXN4-202ENST00000415164 PLP1P60201 277 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 LCN15Q6UWW0 184 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 BCL7BQ9BQE9 202 aa13.42□□□□□ -0.26
UBXN4-202ENST00000415164 GOSR2O14653 212 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 HOXA5P20719 270 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 ID3Q02535 119 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 GFI1BQ5VTD9 330 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 LINC00305Q7Z4B0 112 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 OR10P1Q8NGE3 313 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
UBXN4-202ENST00000415164 C9orf170A2RU37 121 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 PRAC2D3DTV9 90 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 KRTAP10-2P60368 255 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 ESRGQ1W209 222 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 TEPPQ6URK8 271 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 SLC50A1Q9BRV3 221 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 Q9H3A6 140 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 ZNF331Q9NQX6 463 aaPredicted RBP13.4□□□□□ -0.26
UBXN4-202ENST00000415164 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 RNF24Q9Y225 148 aa13.4□□□□□ -0.26
UBXN4-202ENST00000415164 CXCL2P19875 107 aa13.39□□□□□ -0.27
UBXN4-202ENST00000415164 INPP1P49441 399 aa13.39□□□□□ -0.27
UBXN4-202ENST00000415164 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
UBXN4-202ENST00000415164 SMIM8Q96KF7 97 aa13.39□□□□□ -0.27
UBXN4-202ENST00000415164 V9GYH0 126 aa13.39□□□□□ -0.27
UBXN4-202ENST00000415164 TRAV12-3A0A0B4J271 114 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 SLC17A3O00476 420 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
UBXN4-202ENST00000415164 S100A5P33763 92 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 ZNF546Q86UE3 836 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 C20orf144Q9BQM9 153 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
UBXN4-202ENST00000415164 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
UBXN4-202ENST00000415164 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
UBXN4-202ENST00000415164 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
UBXN4-202ENST00000415164 MRPS16Q9Y3D3 137 aaKnown RBP13.37□□□□□ -0.27
UBXN4-202ENST00000415164 LINC00854A0A1B0GVQ3 168 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 CCDC160A6NGH7 325 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 AGPAT2O15120 278 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 LEPP41159 167 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 UBE2MP61081 183 aaKnown RBP13.36□□□□□ -0.27
UBXN4-202ENST00000415164 IAH1Q2TAA2 248 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-202ENST00000415164 PXDC1Q5TGL8 231 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
UBXN4-202ENST00000415164 TRGV2A0A075B6R0 118 aa13.35□□□□□ -0.27
UBXN4-202ENST00000415164 C4orf46Q504U0 113 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms