RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 LAMTOR1Q6IAA8 161 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 ACOT7LQ6ZUV0 252 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 APRG1Q8IVJ8 170 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 FAM24BQ8N5W8 94 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 STXBP6Q8NFX7 210 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 OR51G1Q8NGK1 321 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 Q8WTZ3 238 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 RCHY1Q96PM5 261 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 CIB3Q96Q77 187 aaPredicted RBP3.61□□□□□ -1.83
VPS41-205ENST00000414632 METTL26Q96S19 204 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 CACFD1Q9UGQ2 172 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 RABAC1Q9UI14 185 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 U3KQK5 164 aa3.61□□□□□ -1.83
VPS41-205ENST00000414632 STARD9Q9P2P6 4700 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 IGKV1OR2-108A0A075B7D4 117 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 A0A1W2PS18 150 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 C7orf66A4D0T2 115 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 FAM24AA6NFZ4 105 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 OR4C46A6NHA9 309 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 PMS2P5A8MQ11 134 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 E5RGE8 158 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 K7EPK0 472 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 L7N2F9 121 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 DNASE2O00115 360 aaPredicted RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 SCGB2A1O75556 95 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 RD3LP0DJH9 198 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 GPX4P36969 197 aaPredicted RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 P2RY1P47900 373 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 CAMLGP49069 296 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 CAV2P51636 162 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 CNN1P51911 297 aaKnown RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 DEFA1P59665 94 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 DEFA3P59666 94 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 YPEL3P61236 119 aaPredicted RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 ARL16Q0P5N6 197 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 LRRC37A5PQ49AS3 106 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 ARL6IP6Q8N6S5 226 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 SMIM8Q96KF7 97 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 SPAG8Q99932 426 aaPredicted RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 MS4A6AQ9H2W1 248 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 VSIRQ9H7M9 311 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 GPN1Q9HCN4 374 aaPredicted RBP3.6□□□□□ -1.83
VPS41-205ENST00000414632 DOK5Q9P104 306 aa3.6□□□□□ -1.83
VPS41-205ENST00000414632 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 SSNA1O43805 119 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 CST7O76096 145 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 IL5P05113 134 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 ZNF688P0C7X2 276 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 PRB4P10163 310 aaPredicted RBP3.59□□□□□ -1.83
VPS41-205ENST00000414632 ORM2P19652 201 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 CRYBB3P26998 211 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 EIF2B2P49770 351 aaKnown RBP3.59□□□□□ -1.83
VPS41-205ENST00000414632 DEFB131AP59861 70 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 DEFB1P60022 68 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 SLC38A11Q08AI6 406 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 SMUG1Q53HV7 270 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 TMEM14EPQ6UXP3 125 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.83
VPS41-205ENST00000414632 C9orf47Q6ZRZ4 202 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 IQCF2Q8IXL9 164 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 OR1B1Q8NGR6 318 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 PPP1R14BQ96C90 147 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 NARS2Q96I59 477 aaKnown RBP3.59□□□□□ -1.83
VPS41-205ENST00000414632 C2orf50Q96LR7 162 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 RAB40CQ96S21 281 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 TRGV9Q99603 122 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 TM2D3Q9BRN9 247 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 C11orf1Q9H5F2 150 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 TMEM231Q9H6L2 316 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 SLC25A22Q9H936 323 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 ALG5Q9Y673 324 aa3.59□□□□□ -1.83
VPS41-205ENST00000414632 DYNC2H1Q8NCM8 4307 aaKnown RBP3.58□□□□□ -1.84
VPS41-205ENST00000414632 LOC102724200A0A096LPH7 203 aaPredicted RBP3.58□□□□□ -1.84
VPS41-205ENST00000414632 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 UBE2L5PA0A1B0GUS4 154 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 IGSF23A1L1A6 192 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 KNCNA6PVL3 124 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 SNRPGP15A8MWD9 76 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 K7EQG2 157 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 BUB3O43684 328 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 TSC22D2O75157 780 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 SNRPCP09234 159 aaKnown RBP3.58□□□□□ -1.84
VPS41-205ENST00000414632 BMI1P35226 326 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 ATP5IP56385 69 aaPredicted RBP3.58□□□□□ -1.84
VPS41-205ENST00000414632 H2BFSP57053 126 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 PAFAH1B2P68402 229 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 DEFB135Q30KP9 77 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 PSMG4Q5JS54 123 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 CYP2G1PQ6ZSU1 146 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 BPIFCQ8NFQ6 507 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 ZNF479Q96JC4 524 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 ST6GAL2Q96JF0 529 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 MARVELD1Q9BSK0 173 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 SCRT1Q9BWW7 348 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 GGTLC1Q9BX51 225 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 ARL6Q9H0F7 186 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 OR5AC2Q9NZP5 309 aa3.58□□□□□ -1.84
VPS41-205ENST00000414632 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms