RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
RBBP4-204ENST00000414241 GRAMD2BQ96HH9 432 aa11.3□□□□□ -0.6
RBBP4-204ENST00000414241 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
RBBP4-204ENST00000414241 SMAD5-AS1Q9Y6J3 95 aa11.3□□□□□ -0.6
RBBP4-204ENST00000414241 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
RBBP4-204ENST00000414241 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 C1QL4Q86Z23 238 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 PDZD2O15018 2839 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
RBBP4-204ENST00000414241 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 K7EMT4 169 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 SLC17A3O00476 420 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 LTAP01374 205 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 CXCL1P09341 107 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 MGST1P10620 155 aaKnown RBP11.28□□□□□ -0.6
RBBP4-204ENST00000414241 RAB5BP61020 215 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-204ENST00000414241 C16orf54Q6UWD8 224 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 GOLT1AQ6ZVE7 132 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 DIRC3C9JPN6 131 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
RBBP4-204ENST00000414241 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 IL36BQ9NZH7 164 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
RBBP4-204ENST00000414241 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
RBBP4-204ENST00000414241 OR5I1Q13606 314 aa11.27□□□□□ -0.61
RBBP4-204ENST00000414241 UNQ9165/PRO28630Q6UXU0 137 aa11.27□□□□□ -0.61
RBBP4-204ENST00000414241 SVEP1Q4LDE5 3571 aa11.27□□□□□ -0.61
RBBP4-204ENST00000414241 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 LGALS1P09382 135 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 BMI1P35226 326 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 PSG3Q16557 428 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 IBA57Q5T440 356 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 TMEM183AQ8IXX5 376 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 UFC1Q9Y3C8 167 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 V9GYV3 84 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 IGLV2-11P01706 119 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 Q86TA4 180 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
RBBP4-204ENST00000414241 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
RBBP4-204ENST00000414241 TYMSP04818 313 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 RPL19P84098 196 aaKnown RBP11.25□□□□□ -0.61
RBBP4-204ENST00000414241 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
RBBP4-204ENST00000414241 SRD5A3Q9H8P0 318 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
RBBP4-204ENST00000414241 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 A0A1W2PPQ1 181 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 M0R3E3 92 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
RBBP4-204ENST00000414241 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 KLHDC1Q8N7A1 406 aa11.24□□□□□ -0.61
RBBP4-204ENST00000414241 RNASE7Q9H1E1 156 aaKnown RBP11.24□□□□□ -0.61
RBBP4-204ENST00000414241 GCN1Q92616 2671 aaKnown RBP11.24□□□□□ -0.61
RBBP4-204ENST00000414241 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
RBBP4-204ENST00000414241 SRD5A1P18405 259 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 Q6ZSV7 163 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 PRNTQ86SH4 94 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 SGK494Q96LW2 274 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 IGHV3OR16-13A0A075B7E8 117 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 IGHV3-74A0A0B4J1X5 117 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 ZNF705GA8MUZ8 300 aaPredicted RBP11.23□□□□□ -0.61
RBBP4-204ENST00000414241 CHEK1O14757 476 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 GATCO43716 136 aaKnown RBP11.23□□□□□ -0.61
RBBP4-204ENST00000414241 CDX1P47902 265 aaPredicted RBP11.23□□□□□ -0.61
RBBP4-204ENST00000414241 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 DAZAP1Q96EP5 407 aaKnown RBP11.23□□□□□ -0.61
RBBP4-204ENST00000414241 ZANQ9Y493 2812 aa11.23□□□□□ -0.61
RBBP4-204ENST00000414241 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
RBBP4-204ENST00000414241 LOC105371267A0A1B0GV96 52 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms