RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 K7EQM0 130 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
TTC39A-208ENST00000413473 KLRD1Q13241 179 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 HES1Q14469 280 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 PSG3Q16557 428 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 FBLN7Q53RD9 439 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 CACNA1BQ00975 2339 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 FOXC1Q12948 553 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 C1RLQ9NZP8 487 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 TP73-AS1Q9UF72 201 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 GNG7O60262 68 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 Q6ZVH6 145 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 OR11H6Q8NGC7 330 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 TPPP3Q9BW30 176 aa11.78□□□□□ -0.52
TTC39A-208ENST00000413473 SPTBN1Q01082 2364 aaKnown RBP11.77□□□□□ -0.52
TTC39A-208ENST00000413473 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.52
TTC39A-208ENST00000413473 hDV102S1A0JD36 115 aa11.77□□□□□ -0.52
TTC39A-208ENST00000413473 K7ENP7 123 aa11.77□□□□□ -0.52
TTC39A-208ENST00000413473 RIGQ13278 110 aa11.77□□□□□ -0.52
TTC39A-208ENST00000413473 NPBQ8NG41 125 aa11.77□□□□□ -0.52
TTC39A-208ENST00000413473 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.52
TTC39A-208ENST00000413473 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.52
TTC39A-208ENST00000413473 NDUFA3O95167 84 aa11.77□□□□□ -0.53
TTC39A-208ENST00000413473 OR5AL1P0C617 328 aa11.77□□□□□ -0.53
TTC39A-208ENST00000413473 UNQ5815/PRO19632Q6UWF5 114 aa11.77□□□□□ -0.53
TTC39A-208ENST00000413473 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-208ENST00000413473 ATRXP46100 2492 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 NBL1P41271 181 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 C5orf64Q2M2E5 130 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 C8orf49Q96NF6 230 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 FANCD2OSQ96PS1 177 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 SVEP1Q4LDE5 3571 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 H0Y8G0 127 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 CEACAM3P40198 252 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
TTC39A-208ENST00000413473 TCF21O43680 179 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 ST20Q9HBF5 79 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 TRAV30A0A087WSZ9 112 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 MFAP4P55083 255 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 IGF2RP11717 2491 aa11.75□□□□□ -0.53
TTC39A-208ENST00000413473 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 TMEM190Q8WZ59 177 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 AAMDCQ9H7C9 122 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 LOC105371242A0A075B767 164 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 TMSB15BA0A087X1C1 80 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 CT45A10P0DMU9 189 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 CDSNQ15517 529 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 PET117Q6UWS5 81 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 ORAOV1Q8WV07 137 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 TIMD4Q96H15 378 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 AP5S1Q9NUS5 200 aa11.74□□□□□ -0.53
TTC39A-208ENST00000413473 NCBP2LA6PVI3 153 aaKnown RBP11.73□□□□□ -0.53
TTC39A-208ENST00000413473 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-208ENST00000413473 CCL21O00585 134 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 IGHV3-23P01764 117 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 FBXL19-AS1Q494R0 122 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 PMCHL2Q9BQD1 86 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 HRNRQ86YZ3 2850 aaPredicted RBP11.73□□□□□ -0.53
TTC39A-208ENST00000413473 PRTN3P24158 256 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 NDPQ00604 133 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 PDE6HQ13956 83 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 ZNF562Q6V9R5 426 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 COL6A6A6NMZ7 2263 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 NPIPB5A8MRT5 1133 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 S100A7AQ86SG5 101 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 GATD1Q8NB37 220 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 PRSS3P2Q8NHM4 247 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 ARPC1AQ92747 370 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 C21orf62Q9NYP8 219 aa11.73□□□□□ -0.53
TTC39A-208ENST00000413473 A0A1B0GW15 77 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 HSBP1L1C9JCN9 74 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 M0R1W7 72 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 CSN1S1P47710 185 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
TTC39A-208ENST00000413473 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 MPV17L2Q567V2 206 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 Q6AWC8 147 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 LYZL1Q6UWQ5 148 aa11.72□□□□□ -0.53
TTC39A-208ENST00000413473 CCL25O15444 150 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 PTTG1IPP53801 180 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 SLC25A34Q6PIV7 304 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 FA2HQ7L5A8 372 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
TTC39A-208ENST00000413473 IGKV2-40A0A087WW87 121 aaPredicted RBP11.71□□□□□ -0.54
TTC39A-208ENST00000413473 TMEM213A2RRL7 107 aa11.71□□□□□ -0.54
TTC39A-208ENST00000413473 TMEM189A5PLL7 270 aa11.71□□□□□ -0.54
TTC39A-208ENST00000413473 OR2T8A6NH00 312 aa11.71□□□□□ -0.54
TTC39A-208ENST00000413473 IGKV2D-40P01614 121 aaPredicted RBP11.71□□□□□ -0.54
TTC39A-208ENST00000413473 FAM106CPP0CH98 169 aa11.71□□□□□ -0.54
TTC39A-208ENST00000413473 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms