RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 PLP1P60201 277 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 OR4F17Q8NGA8 305 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 SLC25A39Q9BZJ4 359 aaPredicted RBP11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 USP24Q9UPU5 2620 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 TCF24Q7RTU0 167 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 OSTCQ9NRP0 149 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 SERTAD4Q9NUC0 356 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 F8W735 103 aaPredicted RBP11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 COX19Q49B96 90 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 WDR73Q6P4I2 378 aa11.94□□□□□ -0.5
SCAMP4-202ENST00000409472 A0A1W2PS18 150 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 TMEM8BA6NDV4 472 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 RIPPLY3P57055 190 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 MRPL54Q6P161 138 aaKnown RBP11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 C1orf122Q6ZSJ8 110 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 Q9H3A6 140 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 C7orf69Q9H7B7 122 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 EPDR1Q9UM22 224 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 SH2D7A6NKC9 451 aaPredicted RBP11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 ASCL2Q99929 193 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 SRSF8Q9BRL6 282 aaKnown RBP11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
SCAMP4-202ENST00000409472 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 SAA4P35542 130 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 LINC00322Q6ZN03 302 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 EGR2P11161 476 aaPredicted RBP11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 ZNF562Q6V9R5 426 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 PIP4P2Q8N4L2 257 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 DEFB125Q8N687 156 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
SCAMP4-202ENST00000409472 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 IGHV7-81A0A0B4J1V7 117 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 OVOL3O00110 214 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 IL4P05112 153 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 NAT8BQ9UHF3 227 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 MINOS1Q5TGZ0 78 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 C12orf54Q6X4T0 127 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 ATOH7Q8N100 152 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 Q8N9W7 124 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 MINOS1-NBL1R4GNA1 71 aa11.91□□□□□ -0.5
SCAMP4-202ENST00000409472 OR2J3O76001 311 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 TCRAP04437 139 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 UBE2G1P62253 170 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 EBI3Q14213 229 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
SCAMP4-202ENST00000409472 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.51
SCAMP4-202ENST00000409472 TMEM136Q6ZRR5 245 aa11.9□□□□□ -0.51
SCAMP4-202ENST00000409472 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.51
SCAMP4-202ENST00000409472 IGHV3OR16-8A0A075B7F1 116 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 H3BRN7 92 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 ERASQ7Z444 233 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 CENPEQ02224 2701 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 FBN2P35556 2912 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 VWC2LB2RUY7 222 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 G3V4G9 280 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 GNG7O60262 68 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 UBE2E1P51965 193 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 SAMD13Q5VXD3 122 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
SCAMP4-202ENST00000409472 IGHV3-35A0A0C4DH35 117 aa11.88□□□□□ -0.51
SCAMP4-202ENST00000409472 SCGB1A1P11684 91 aa11.88□□□□□ -0.51
SCAMP4-202ENST00000409472 IGLL1P15814 213 aa11.88□□□□□ -0.51
SCAMP4-202ENST00000409472 TTC9CQ8N5M4 171 aa11.88□□□□□ -0.51
SCAMP4-202ENST00000409472 OOSP1A8MZH6 123 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 PSG9Q00887 426 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 Q56UQ5 140 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 MLST8Q9BVC4 326 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 CD5LO43866 347 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
SCAMP4-202ENST00000409472 NTF3P20783 257 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms