RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 ANKRD17O75179 2603 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 OVOL3O00110 214 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 ACTL6BO94805 426 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 NCR2O95944 276 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 FOXI1Q12951 378 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 Q8TCH9 128 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 NANOS1Q8WY41 292 aaKnown RBP8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 RND1Q92730 232 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 TMEM140Q9NV12 185 aa8.53□□□□□ -1.04
NIF3L1-204ENST00000409357 AKAP9Q99996 3911 aa8.52□□□□□ -1.04
NIF3L1-204ENST00000409357 A0A096LNJ9 63 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 C5orf49A4QMS7 147 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 C19orf84I3L1E1 186 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 PROP1O75360 226 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 PAX8Q06710 450 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 GGNQ86UU5 652 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 CEND1Q8N111 149 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 FAM57AQ8TBR7 257 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 PLPPR2Q96GM1 343 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 PAXXQ9BUH6 204 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 SPRR3Q9UBC9 169 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 PRNDQ9UKY0 176 aa8.52□□□□□ -1.05
NIF3L1-204ENST00000409357 HCFC1P51610 2035 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 SPINT2O43291 252 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 SNAI2O43623 268 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 FCGR3BO75015 233 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 EVI2AP22794 236 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 FXYD2P54710 66 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 FAM90A1Q86YD7 464 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 S1PR3Q99500 378 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 USF3Q68DE3 2245 aa8.51□□□□□ -1.05
NIF3L1-204ENST00000409357 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 IGKV1OR2-108A0A075B7D4 117 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 A0A1B0GUT8 65 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 C15orf65H3BRN8 121 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 PRRG2O14669 202 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 SLC25A17O43808 307 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 FSTL3O95633 263 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 IGHG3P01860 377 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 PRCDQ00LT1 54 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 PLP2Q04941 152 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 CD69Q07108 199 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 Q6ZUT4 128 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 DAZAP1Q96EP5 407 aaKnown RBP8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 ZNF414Q96IQ9 312 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 PGLYRP4Q96LB8 373 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 PRRG4Q9BZD6 226 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 FAM215AQ9Y5M1 114 aa8.5□□□□□ -1.05
NIF3L1-204ENST00000409357 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 HBDP02042 147 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 CCL2P13500 99 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 MPV17P39210 176 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 TCTAP57738 103 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 RRN3P1Q2M238 152 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 ITLN1Q8WWA0 313 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 RNF183Q96D59 192 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 C18orf15Q96N68 181 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 VKORC1Q9BQB6 163 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 IFI27L2Q9H2X8 130 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 PSPNO60542 156 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 GCSHP23434 173 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 WDR86Q86TI4 376 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 MCRIP2Q9BUT9 160 aaKnown RBP8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 VPS13CQ709C8 3753 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 DOCK7Q96N67 2140 aa8.49□□□□□ -1.05
NIF3L1-204ENST00000409357 M0QXV9 152 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 APOMO95445 188 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 MOSP00540 346 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 HOXB4P17483 251 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 SRD5A1P18405 259 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 TMEM177Q53S58 311 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 Q6Q795 121 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 ACP7Q6ZNF0 438 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 PDPNQ86YL7 162 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 THAP8Q8NA92 274 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 UBALD1Q8TB05 177 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 RAB9BQ9NP90 201 aa8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 TET2Q6N021 2002 aaPredicted RBP8.48□□□□□ -1.05
NIF3L1-204ENST00000409357 TRGV5A0A0B4J1U4 118 aa8.47□□□□□ -1.05
NIF3L1-204ENST00000409357 TRAV3A0A0B4J244 114 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms