RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
SSB-202ENST00000409333 C12orf54Q6X4T0 127 aa12.74□□□□□ -0.37
SSB-202ENST00000409333 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
SSB-202ENST00000409333 A0A087X0K7 114 aa12.73□□□□□ -0.37
SSB-202ENST00000409333 ZNF785A8K8V0 405 aa12.73□□□□□ -0.37
SSB-202ENST00000409333 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
SSB-202ENST00000409333 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
SSB-202ENST00000409333 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
SSB-202ENST00000409333 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 A0A1W2PRE2 83 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 C9JQL5 133 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 M0QZ24 198 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 BMI1P35226 326 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
SSB-202ENST00000409333 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
SSB-202ENST00000409333 CD5P06127 495 aa12.71□□□□□ -0.37
SSB-202ENST00000409333 CD81P60033 236 aa12.71□□□□□ -0.37
SSB-202ENST00000409333 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
SSB-202ENST00000409333 MEF2BQ02080 365 aaPredicted RBP12.71□□□□□ -0.37
SSB-202ENST00000409333 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
SSB-202ENST00000409333 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
SSB-202ENST00000409333 HELTA6NFD8 242 aa12.71□□□□□ -0.38
SSB-202ENST00000409333 PDE6HQ13956 83 aa12.71□□□□□ -0.38
SSB-202ENST00000409333 EXOC3-AS1Q8N2X6 119 aa12.71□□□□□ -0.38
SSB-202ENST00000409333 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.38
SSB-202ENST00000409333 SPATA3Q8NHX4 192 aa12.71□□□□□ -0.38
SSB-202ENST00000409333 Q9H3A6 140 aa12.71□□□□□ -0.38
SSB-202ENST00000409333 CMYA5Q8N3K9 4069 aa12.7□□□□□ -0.38
SSB-202ENST00000409333 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
SSB-202ENST00000409333 ANK2Q01484 3957 aa12.7□□□□□ -0.38
SSB-202ENST00000409333 IGFL4Q6B9Z1 124 aa12.7□□□□□ -0.38
SSB-202ENST00000409333 TREM1Q9NP99 234 aa12.7□□□□□ -0.38
SSB-202ENST00000409333 TAGLN2P37802 199 aaKnown RBP12.69□□□□□ -0.38
SSB-202ENST00000409333 PEA15Q15121 130 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 SHISA2Q6UWI4 295 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 GBGT1Q8N5D6 347 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 NRN1Q9NPD7 142 aa12.69□□□□□ -0.38
SSB-202ENST00000409333 SORL1Q92673 2214 aa12.68□□□□□ -0.38
SSB-202ENST00000409333 PGPA6NDG6 321 aa12.68□□□□□ -0.38
SSB-202ENST00000409333 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
SSB-202ENST00000409333 PRB4P10163 310 aaPredicted RBP12.68□□□□□ -0.38
SSB-202ENST00000409333 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
SSB-202ENST00000409333 OTORQ9NRC9 128 aa12.68□□□□□ -0.38
SSB-202ENST00000409333 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
SSB-202ENST00000409333 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 SOCS3O14543 225 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 ZNF253O75346 499 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 SAP30O75446 220 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 MEOX2P50222 304 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 PSG9Q00887 426 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 NKX6-2Q9C056 277 aaPredicted RBP12.67□□□□□ -0.38
SSB-202ENST00000409333 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
SSB-202ENST00000409333 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 GNG5P63218 68 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 CD300EQ496F6 205 aaPredicted RBP12.66□□□□□ -0.38
SSB-202ENST00000409333 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 CYB561D1Q8N8Q1 229 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 MDFIQ99750 246 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 TXNDC17Q9BRA2 123 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 SLC50A1Q9BRV3 221 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 AAMDCQ9H7C9 122 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 M0R3E3 92 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 SLC25A5P05141 298 aaKnown RBP12.66□□□□□ -0.38
SSB-202ENST00000409333 TFPI2P48307 235 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 CEBPGP53567 150 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 WFDC3Q8IUB2 231 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 RPH3ALQ9UNE2 315 aa12.66□□□□□ -0.38
SSB-202ENST00000409333 PDE6DO43924 150 aa12.65□□□□□ -0.38
SSB-202ENST00000409333 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
SSB-202ENST00000409333 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 C5orf17Q8NAS9 161 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 F6UZH7 168 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
SSB-202ENST00000409333 TSPAN4O14817 238 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 FAM24BQ8N5W8 94 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 DERL1Q9BUN8 251 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
SSB-202ENST00000409333 NOTCH3Q9UM47 2321 aa12.63□□□□□ -0.39
SSB-202ENST00000409333 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
SSB-202ENST00000409333 TMEM250H0YL14 139 aa12.63□□□□□ -0.39
SSB-202ENST00000409333 ATP6V1G1O75348 118 aa12.63□□□□□ -0.39
SSB-202ENST00000409333 IGLV1-51P01701 117 aa12.63□□□□□ -0.39
SSB-202ENST00000409333 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
SSB-202ENST00000409333 CMTM2Q8TAZ6 248 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms