RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 PAFAH1B2P68402 229 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 LCN15Q6UWW0 184 aa15.37■□□□□ 0.05
VSX1-203ENST00000409285 PCNPQ8WW12 178 aaKnown RBP15.37■□□□□ 0.05
VSX1-203ENST00000409285 H3BQ15 152 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 SOCS3O14543 225 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 EIF3GO75821 320 aaKnown RBP eCLIP15.36■□□□□ 0.05
VSX1-203ENST00000409285 UBE2L3P68036 154 aaKnown RBP15.36■□□□□ 0.05
VSX1-203ENST00000409285 EGFEM1PQ0D2K5 195 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 SFT2D1Q8WV19 159 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 ZNF256Q9Y2P7 627 aaPredicted RBP15.36■□□□□ 0.05
VSX1-203ENST00000409285 SELENOKQ9Y6D0 94 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 FBN3Q75N90 2809 aa15.36■□□□□ 0.05
VSX1-203ENST00000409285 TRBV19A0A075B6N1 114 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 ZNF785A8K8V0 405 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 OR10J4P0C629 311 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 GCHFRP30047 84 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 BLOC1S1P78537 153 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 SAMD5Q5TGI4 173 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 TMEM167BQ9NRX6 74 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 ZNF586Q9NXT0 402 aa15.35■□□□□ 0.05
VSX1-203ENST00000409285 OR4C46A6NHA9 309 aa15.34■□□□□ 0.05
VSX1-203ENST00000409285 K7EQG2 157 aa15.34■□□□□ 0.05
VSX1-203ENST00000409285 NBEAP1P0C6P0 100 aa15.34■□□□□ 0.05
VSX1-203ENST00000409285 OXLD1Q5BKU9 147 aa15.34■□□□□ 0.05
VSX1-203ENST00000409285 ZMAT5Q9UDW3 170 aaKnown RBP15.34■□□□□ 0.05
VSX1-203ENST00000409285 TEX46H3BTG2 121 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 HBE1P02100 147 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 NMBP08949 121 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 PSMB3P49720 205 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 BEAN1Q3B7T3 259 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 LYPD6BQ8NI32 183 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 SLC50A1Q9BRV3 221 aa15.33■□□□□ 0.05
VSX1-203ENST00000409285 DNASE2O00115 360 aaPredicted RBP15.33■□□□□ 0.04
VSX1-203ENST00000409285 ISLRO14498 428 aa15.33■□□□□ 0.04
VSX1-203ENST00000409285 FGF8P55075 233 aaPredicted RBP15.33■□□□□ 0.04
VSX1-203ENST00000409285 CLLU1Q5K131 121 aa15.33■□□□□ 0.04
VSX1-203ENST00000409285 ZNF331Q9NQX6 463 aaPredicted RBP15.33■□□□□ 0.04
VSX1-203ENST00000409285 ARL2-SNX15V9GYD0 113 aa15.33■□□□□ 0.04
VSX1-203ENST00000409285 IGKV3-7A0A075B6H7 116 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 NDUFB4O95168 129 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 LYPD1Q8N2G4 141 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 GBGT1Q8N5D6 347 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 FAM110AQ9BQ89 295 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 CLEC5AQ9NY25 188 aa15.32■□□□□ 0.04
VSX1-203ENST00000409285 SLC17A3O00476 420 aa15.31■□□□□ 0.04
VSX1-203ENST00000409285 PSG9Q00887 426 aa15.31■□□□□ 0.04
VSX1-203ENST00000409285 PMS2P11Q13670 270 aa15.31■□□□□ 0.04
VSX1-203ENST00000409285 GUCA2BQ16661 112 aa15.31■□□□□ 0.04
VSX1-203ENST00000409285 G3V4G9 280 aa15.3■□□□□ 0.04
VSX1-203ENST00000409285 PPT1P50897 306 aa15.3■□□□□ 0.04
VSX1-203ENST00000409285 BLNKQ8WV28 456 aa15.3■□□□□ 0.04
VSX1-203ENST00000409285 TRAV8-2A0A0B4J237 113 aa15.29■□□□□ 0.04
VSX1-203ENST00000409285 ID1P41134 155 aa15.29■□□□□ 0.04
VSX1-203ENST00000409285 SNRPD3P62318 126 aaKnown RBP15.29■□□□□ 0.04
VSX1-203ENST00000409285 KPRPQ5T749 579 aaPredicted RBP15.29■□□□□ 0.04
VSX1-203ENST00000409285 C16orf92Q96LL3 132 aa15.29■□□□□ 0.04
VSX1-203ENST00000409285 TMPRSS5Q9H3S3 457 aa15.29■□□□□ 0.04
VSX1-203ENST00000409285 A0A1W2PRE2 83 aa15.28■□□□□ 0.04
VSX1-203ENST00000409285 H3BTX0 84 aa15.28■□□□□ 0.04
VSX1-203ENST00000409285 SNRPCP09234 159 aaKnown RBP15.28■□□□□ 0.04
VSX1-203ENST00000409285 TFPI2P48307 235 aa15.28■□□□□ 0.04
VSX1-203ENST00000409285 A0A1B0GV50 99 aa15.27■□□□□ 0.04
VSX1-203ENST00000409285 CMC4P56277 68 aaPredicted RBP15.27■□□□□ 0.04
VSX1-203ENST00000409285 IQCF2Q8IXL9 164 aa15.27■□□□□ 0.04
VSX1-203ENST00000409285 FAM24BQ8N5W8 94 aa15.27■□□□□ 0.04
VSX1-203ENST00000409285 WFDC3Q8IUB2 231 aa15.27■□□□□ 0.03
VSX1-203ENST00000409285 MRPL53Q96EL3 112 aaKnown RBP15.27■□□□□ 0.03
VSX1-203ENST00000409285 NKX6-2Q9C056 277 aaPredicted RBP15.27■□□□□ 0.03
VSX1-203ENST00000409285 AAMDCQ9H7C9 122 aa15.27■□□□□ 0.03
VSX1-203ENST00000409285 MANBALQ9NQG1 85 aa15.27■□□□□ 0.03
VSX1-203ENST00000409285 PRELID1Q9Y255 219 aa15.27■□□□□ 0.03
VSX1-203ENST00000409285 CCL20P78556 96 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 ODF3L2Q3SX64 289 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 GTSCR1Q86UQ5 136 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 ARL6IP6Q8N6S5 226 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 Q9H3A6 140 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 OTORQ9NRC9 128 aa15.26■□□□□ 0.03
VSX1-203ENST00000409285 AGRNO00468 2067 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 FAM74A7A6NL05 159 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 ZNF688P0C7X2 276 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 KRTAP10-11P60412 298 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 RANP62826 216 aaKnown RBP15.25■□□□□ 0.03
VSX1-203ENST00000409285 MAP6D1Q9H9H5 199 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 C19orf73Q9NVV2 129 aa15.25■□□□□ 0.03
VSX1-203ENST00000409285 PSG3Q16557 428 aa15.24■□□□□ 0.03
VSX1-203ENST00000409285 EXOC3-AS1Q8N2X6 119 aa15.24■□□□□ 0.03
VSX1-203ENST00000409285 C20orf173Q96LM9 149 aa15.24■□□□□ 0.03
VSX1-203ENST00000409285 YTHDF2Q9Y5A9 579 aaKnown RBP15.24■□□□□ 0.03
VSX1-203ENST00000409285 GGTLC3B5MD39 225 aa15.23■□□□□ 0.03
VSX1-203ENST00000409285 CD7P09564 240 aa15.23■□□□□ 0.03
VSX1-203ENST00000409285 TAGLN2P37802 199 aaKnown RBP15.23■□□□□ 0.03
VSX1-203ENST00000409285 CD81P60033 236 aa15.23■□□□□ 0.03
VSX1-203ENST00000409285 PSMG4Q5JS54 123 aa15.23■□□□□ 0.03
VSX1-203ENST00000409285 RNF182Q8N6D2 247 aa15.23■□□□□ 0.03
VSX1-203ENST00000409285 OR11H12B2RN74 326 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 IFNA1P01562 189 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 ICAM4Q14773 271 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 IGFL4Q6B9Z1 124 aa15.22■□□□□ 0.03
VSX1-203ENST00000409285 TXNDC17Q9BRA2 123 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms