RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 SERTAD4Q9NUC0 356 aa22.41■■□□□ 1.18
CSNK1E-205ENST00000405675 FAM223BA6NKX1 122 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 CA1P00915 261 aaPredicted RBP22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 IGLV2-11P01706 119 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 PRR27Q6MZM9 219 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 Q71RC1 249 aaPredicted RBP22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 FAM223AQ8IWN6 122 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 SMAD5-AS1Q9Y6J3 95 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 S100A9P06702 114 aaKnown RBP22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 LYPD1Q8N2G4 141 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 BTF3L4Q96K17 158 aa22.4■■□□□ 1.18
CSNK1E-205ENST00000405675 CLPSL1A2RUU4 121 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 ZNF705GA8MUZ8 300 aaPredicted RBP22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 FRMD6-AS1P0C7T7 363 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 TCL1AP56279 114 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 FAM231DQ6ZW35 169 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 NUDT10Q8NFP7 164 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 NUDT11Q96G61 164 aa22.39■■□□□ 1.18
CSNK1E-205ENST00000405675 TRAV9-1A0A075B6T8 112 aa22.39■■□□□ 1.17
CSNK1E-205ENST00000405675 GFI1BQ5VTD9 330 aa22.39■■□□□ 1.17
CSNK1E-205ENST00000405675 C9orf139Q6ZV77 190 aa22.39■■□□□ 1.17
CSNK1E-205ENST00000405675 LINC00518Q8N0U6 118 aa22.39■■□□□ 1.17
CSNK1E-205ENST00000405675 RPL7P18124 248 aaKnown RBP22.38■■□□□ 1.17
CSNK1E-205ENST00000405675 TPPP2P59282 170 aa22.38■■□□□ 1.17
CSNK1E-205ENST00000405675 Q86TA4 180 aa22.38■■□□□ 1.17
CSNK1E-205ENST00000405675 M0R3E3 92 aa22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 IL17RELQ6ZVW7 336 aa22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 IFITM10A6NMD0 228 aa22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 PDE6HQ13956 83 aa22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 LINC00322Q6ZN03 302 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 KLK15Q9H2R5 256 aa22.37■■□□□ 1.17
CSNK1E-205ENST00000405675 IER3P46695 156 aa22.36■■□□□ 1.17
CSNK1E-205ENST00000405675 KRTAP1-1Q07627 177 aa22.36■■□□□ 1.17
CSNK1E-205ENST00000405675 SMIM12Q96EX1 92 aa22.36■■□□□ 1.17
CSNK1E-205ENST00000405675 TRAPPC1Q9Y5R8 145 aa22.36■■□□□ 1.17
CSNK1E-205ENST00000405675 SMIM27A0A1W2PRY6 76 aa22.36■■□□□ 1.17
CSNK1E-205ENST00000405675 GATCO43716 136 aaKnown RBP22.35■■□□□ 1.17
CSNK1E-205ENST00000405675 PRNTQ86SH4 94 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 ASCL2Q99929 193 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 IGHV3-66A0A0C4DH42 116 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 SPINK4O60575 86 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 TRBV12-3P01733 135 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 CBLN1P23435 193 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 CDX1P47902 265 aaPredicted RBP22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 TMEM95Q3KNT9 176 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 LCNL1Q6ZST4 164 aa22.34■■□□□ 1.17
CSNK1E-205ENST00000405675 DIRC3C9JPN6 131 aa22.33■■□□□ 1.17
CSNK1E-205ENST00000405675 ZNF207O43670 478 aaKnown RBP22.33■■□□□ 1.17
CSNK1E-205ENST00000405675 BUB3O43684 328 aa22.33■■□□□ 1.17
CSNK1E-205ENST00000405675 BRI3O95415 125 aa22.33■■□□□ 1.17
CSNK1E-205ENST00000405675 SLC35B1P78383 322 aa22.33■■□□□ 1.17
CSNK1E-205ENST00000405675 MXRA5Q9NR99 2828 aa22.33■■□□□ 1.16
CSNK1E-205ENST00000405675 APOHP02749 345 aaPredicted RBP22.33■■□□□ 1.16
CSNK1E-205ENST00000405675 TMEM190Q8WZ59 177 aa22.33■■□□□ 1.16
CSNK1E-205ENST00000405675 ATP6V0BQ99437 205 aa22.33■■□□□ 1.16
CSNK1E-205ENST00000405675 IGHV3OR16-13A0A075B7E8 117 aa22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 IGHV3-74A0A0B4J1X5 117 aa22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 H3BUA1 57 aa22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 CFHR3Q02985 330 aa22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 RELQ04864 619 aaPredicted RBP22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 Q6YL49 198 aa22.32■■□□□ 1.16
CSNK1E-205ENST00000405675 PF4V1P10720 104 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 TMEM183AQ8IXX5 376 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 TMEM75Q8N9X5 138 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 GRAMD2BQ96HH9 432 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 AAMDCQ9H7C9 122 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 TRBV6-1A0A0K0K1D8 114 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 IGLV1-40P01703 118 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 PSG9Q00887 426 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 IGFL4Q6B9Z1 124 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 TLN2Q9Y4G6 2542 aa22.31■■□□□ 1.16
CSNK1E-205ENST00000405675 IGHV3-49A0A0A0MS15 119 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 IGHV3-11P01762 117 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 ARL3P36405 182 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 PDZD11Q5EBL8 140 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 HIST3H2BBQ8N257 126 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 CD5LO43866 347 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 S100A7P31151 101 aa22.3■■□□□ 1.16
CSNK1E-205ENST00000405675 C19orf71A6NCJ1 209 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 ZNF785A8K8V0 405 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 PSG3Q16557 428 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 GPR61Q9BZJ8 451 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 ZNF492Q9P255 531 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 PSG8Q9UQ74 426 aa22.29■■□□□ 1.16
CSNK1E-205ENST00000405675 HLA-DMBP28068 263 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 USMG5Q96IX5 58 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 XKRY2A2RUG3 117 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 IGHG4P01861 327 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 OR5R1Q8NH85 324 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 METTL26Q96S19 204 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 PRSS22Q9GZN4 317 aa22.28■■□□□ 1.16
CSNK1E-205ENST00000405675 YAE1D1Q9NRH1 226 aa22.27■■□□□ 1.16
CSNK1E-205ENST00000405675 HOXA3O43365 443 aaPredicted RBP22.27■■□□□ 1.15
CSNK1E-205ENST00000405675 PRDM13Q9H4Q3 707 aa22.27■■□□□ 1.15
CSNK1E-205ENST00000405675 U3KQE9 123 aa22.27■■□□□ 1.15
CSNK1E-205ENST00000405675 MYO9AB2RTY4 2548 aa22.26■■□□□ 1.15
CSNK1E-205ENST00000405675 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP22.26■■□□□ 1.15
CSNK1E-205ENST00000405675 IZUMO1RA6ND01 250 aa22.26■■□□□ 1.15
CSNK1E-205ENST00000405675 K7EQM0 130 aa22.26■■□□□ 1.15
CSNK1E-205ENST00000405675 MEOX2P50222 304 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms