RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ZNF747Q9BV97 191 aa3.01□□□□□ -1.93
RTN4-209ENST00000405240 H3BTX0 84 aa3□□□□□ -1.93
RTN4-209ENST00000405240 NTF3P20783 257 aa3□□□□□ -1.93
RTN4-209ENST00000405240 COL8A1P27658 744 aa3□□□□□ -1.93
RTN4-209ENST00000405240 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
RTN4-209ENST00000405240 CRIP2P52943 208 aaPredicted RBP3□□□□□ -1.93
RTN4-209ENST00000405240 MFAP4P55083 255 aa3□□□□□ -1.93
RTN4-209ENST00000405240 RPS20P60866 119 aaKnown RBP3□□□□□ -1.93
RTN4-209ENST00000405240 DAZAP1Q96EP5 407 aaKnown RBP3□□□□□ -1.93
RTN4-209ENST00000405240 C8orf49Q96NF6 230 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ATP6V0BQ99437 205 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ZFAND3Q9H8U3 227 aa3□□□□□ -1.93
RTN4-209ENST00000405240 CLEC5AQ9NY25 188 aa3□□□□□ -1.93
RTN4-209ENST00000405240 COX11Q9Y6N1 276 aa3□□□□□ -1.93
RTN4-209ENST00000405240 BOD1L1Q8NFC6 3051 aa3□□□□□ -1.93
RTN4-209ENST00000405240 LOC105371242A0A075B767 164 aa3□□□□□ -1.93
RTN4-209ENST00000405240 IGHV7-81A0A0B4J1V7 117 aa3□□□□□ -1.93
RTN4-209ENST00000405240 OR4C46A6NHA9 309 aa3□□□□□ -1.93
RTN4-209ENST00000405240 APELAP0DMC3 54 aa3□□□□□ -1.93
RTN4-209ENST00000405240 FGF6P10767 208 aa3□□□□□ -1.93
RTN4-209ENST00000405240 COX7A1P24310 79 aa3□□□□□ -1.93
RTN4-209ENST00000405240 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
RTN4-209ENST00000405240 KLF17Q5JT82 389 aaPredicted RBP3□□□□□ -1.93
RTN4-209ENST00000405240 FAM104BQ5XKR9 115 aa3□□□□□ -1.93
RTN4-209ENST00000405240 S100A7AQ86SG5 101 aa3□□□□□ -1.93
RTN4-209ENST00000405240 Q8N9W7 124 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ARPC1AQ92747 370 aa3□□□□□ -1.93
RTN4-209ENST00000405240 U3KQE9 123 aa3□□□□□ -1.93
RTN4-209ENST00000405240 DMXL2Q8TDJ6 3036 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ATMQ13315 3056 aa3□□□□□ -1.93
RTN4-209ENST00000405240 CLPSL1A2RUU4 121 aa3□□□□□ -1.93
RTN4-209ENST00000405240 K7EP13 123 aa3□□□□□ -1.93
RTN4-209ENST00000405240 K7EQM0 130 aa3□□□□□ -1.93
RTN4-209ENST00000405240 M0QZ24 198 aa3□□□□□ -1.93
RTN4-209ENST00000405240 LEPROTL1O95214 131 aa3□□□□□ -1.93
RTN4-209ENST00000405240 BRI3O95415 125 aa3□□□□□ -1.93
RTN4-209ENST00000405240 IL4P05112 153 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ZFP36P26651 326 aaKnown RBP3□□□□□ -1.93
RTN4-209ENST00000405240 G0S2P27469 103 aa3□□□□□ -1.93
RTN4-209ENST00000405240 RHOGP84095 191 aa3□□□□□ -1.93
RTN4-209ENST00000405240 VMO1Q7Z5L0 202 aa3□□□□□ -1.93
RTN4-209ENST00000405240 FAM110DQ8TAY7 271 aaPredicted RBP3□□□□□ -1.93
RTN4-209ENST00000405240 ZNF502Q8TBZ5 544 aa3□□□□□ -1.93
RTN4-209ENST00000405240 PRR25Q96S07 402 aa3□□□□□ -1.93
RTN4-209ENST00000405240 ONECUT1Q9UBC0 465 aa3□□□□□ -1.93
RTN4-209ENST00000405240 DCHS2Q6V1P9 2916 aa3□□□□□ -1.93
RTN4-209ENST00000405240 SH2D1AO60880 128 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 TFPI2P48307 235 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 RELQ04864 619 aaPredicted RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 LINC01559Q495D7 138 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 Q56UQ5 140 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 CCDC144NLQ6NUI1 221 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 C2orf91Q6ZV80 131 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 ATOH7Q8N100 152 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 RNF185Q96GF1 192 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 ZMAT4Q9H898 229 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 HSPB8Q9UJY1 196 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 HRNRQ86YZ3 2850 aaPredicted RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 A0A1W2PRD5 423 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 A0A1W2PRF3 423 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 A0A1W2PRM7 423 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 CHEK1O14757 476 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 CCL25O15444 150 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 ZNF80P51504 273 aaPredicted RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 KLRD1Q13241 179 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 KIR3DS1Q14943 382 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 BVES-AS1Q5T3Y7 98 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 MRPL53Q96EL3 112 aaKnown RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 PMCHL2Q9BQD1 86 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 C21orf62Q9NYP8 219 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 SH3BGRL2Q9UJC5 107 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 RPH3ALQ9UNE2 315 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 PRRC2CQ9Y520 2896 aaKnown RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 PIEZO2Q9H5I5 2752 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 IGHV4-4A0A075B6R2 117 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 IGHV2-70DA0A0C4DH43 119 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 CNIH1O95406 144 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 NCR2O95944 276 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 COX8AP10176 69 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 RPL7P18124 248 aaKnown RBP2.99□□□□□ -1.93
RTN4-209ENST00000405240 ARF6P62330 175 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 LGALS9BQ3B8N2 356 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 LGALS9CQ6DKI2 356 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 LYZL1Q6UWQ5 148 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 OR1N2Q8NGR9 330 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 MAP1LC3CQ9BXW4 147 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 TMEM191AQ9H0A3 160 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 SIGLEC8Q9NYZ4 499 aa2.99□□□□□ -1.93
RTN4-209ENST00000405240 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 M0R3E3 92 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 TAX1BP3O14907 124 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 GNG7O60262 68 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 FAM106CPP0CH98 169 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 UBE2E1P51965 193 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 KLRB1Q12918 225 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 UBE2V1Q13404 147 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 FAM106AQ4KMX7 169 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 MRPL51Q4U2R6 128 aaKnown RBP2.98□□□□□ -1.93
RTN4-209ENST00000405240 TIMD4Q96H15 378 aa2.98□□□□□ -1.93
RTN4-209ENST00000405240 MGAQ8IWI9 3026 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms