RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 H3BT86 120 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 LYZL6O75951 148 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 NCR2O95944 276 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 IGHV3OR15-7A0A075B7D8 119 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 HEATR5AQ86XA9 2040 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 E9PLN8 166 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 EFNA2O43921 213 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 FGF6P10767 208 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 SRD5A1P18405 259 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 MRPL14Q6P1L8 145 aaKnown RBP8.06□□□□□ -1.12
PTPRM-203ENST00000400060 FAM57AQ8TBR7 257 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 FXYD5Q96DB9 178 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 IGKV3D-15A0A087WSY6 115 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 PPIFP30405 207 aaKnown RBP8.06□□□□□ -1.12
PTPRM-203ENST00000400060 SP5Q6BEB4 398 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-203ENST00000400060 PRDM6Q9NQX0 595 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 CFC1P0CG37 223 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 LINC00310P59036 64 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 SAP25Q8TEE9 199 aa8.06□□□□□ -1.12
PTPRM-203ENST00000400060 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
PTPRM-203ENST00000400060 PTPRZ1P23471 2315 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 TCF15Q12870 199 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 RNF125Q96EQ8 232 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 MRPL35Q9NZE8 188 aaKnown RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 LINC00312Q9Y6C7 94 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 RHODO00212 210 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 TIMM23O14925 209 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 FAM168AQ92567 244 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 SLC25A15Q9Y619 301 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 HELZP42694 1942 aaKnown RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 AHCTF1Q8WYP5 2266 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 SPAARA0A1B0GVQ0 90 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 GHRHP01286 108 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 NEU4Q8WWR8 484 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 RP1P56715 2156 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 IGHV3-21A0A0B4J1V1 117 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 PCOLCEQ15113 449 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 TMEM219Q86XT9 240 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 C3orf22Q8N5N4 141 aa8.05□□□□□ -1.12
PTPRM-203ENST00000400060 ZNF837Q96EG3 531 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-203ENST00000400060 ALKBH6Q3KRA9 238 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 FREM3P0C091 2139 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 TRBV10-2A0A0K0K1G8 114 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 RBMY1BA6NDE4 496 aaKnown RBP8.04□□□□□ -1.12
PTPRM-203ENST00000400060 RBMY1EA6NEQ0 496 aaKnown RBP8.04□□□□□ -1.12
PTPRM-203ENST00000400060 AGFG2O95081 481 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 CELA2AP08217 269 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 RBMY1DP0C7P1 496 aaKnown RBP8.04□□□□□ -1.12
PTPRM-203ENST00000400060 RBMY1A1P0DJD3 496 aaKnown RBP8.04□□□□□ -1.12
PTPRM-203ENST00000400060 RBMY1CP0DJD4 496 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 MBD6Q96DN6 1003 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 DPH3P1Q9H4G8 78 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 KIAA1671Q9BY89 1806 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 TRAV3A0A0B4J244 114 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 PATE3B3GLJ2 98 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 TTTY12Q9BZ98 90 aa8.04□□□□□ -1.12
PTPRM-203ENST00000400060 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 NPFFO15130 113 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 GLRXP35754 106 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 RSPO4Q2I0M5 234 aaPredicted RBP8.03□□□□□ -1.12
PTPRM-203ENST00000400060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 TDRD6O60522 2096 aaKnown RBP8.03□□□□□ -1.12
PTPRM-203ENST00000400060 MDC1Q14676 2089 aaKnown RBP8.03□□□□□ -1.12
PTPRM-203ENST00000400060 COL4A3Q01955 1670 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 WNT9BO14905 357 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 COX6A1P12074 109 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 SPINK2P20155 84 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 TMEM258P61165 79 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 TRIP6Q15654 476 aaKnown RBP8.03□□□□□ -1.12
PTPRM-203ENST00000400060 FANCMQ8IYD8 2048 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 PLXND1Q9Y4D7 1925 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 VWA8A3KMH1 1905 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
PTPRM-203ENST00000400060 MOB4Q9Y3A3 225 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 RNF114Q9Y508 228 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 K7EM74 188 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 LINC01620Q4KN68 170 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-203ENST00000400060 CARD19Q96LW7 228 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 C1orf43Q9BWL3 253 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 TRAV21A0A0B4J279 112 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 VCYO14598 125 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 FXYD7P58549 80 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 CCL13Q99616 98 aa8.02□□□□□ -1.13
PTPRM-203ENST00000400060 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 CD3EP07766 207 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 CFAP126Q5VTH2 177 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 LINC00643Q86TS7 51 aa8.01□□□□□ -1.13
PTPRM-203ENST00000400060 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms