RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ZNF837Q96EG3 531 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 E7EQL1 145 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 RPL18AQ02543 176 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 AZU1P20160 251 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 TFF3Q07654 80 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 C1QTNF5Q9BXJ0 243 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 RPUSD1Q9UJJ7 312 aaKnown RBP8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 ANK1P16157 1881 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 COL6A6A6NMZ7 2263 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 HEPN1Q6WQI6 88 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 RASL10AQ92737 203 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 TRBV9A0A0B4J1U6 114 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 MIR17HGQ75NE6 70 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 Q6ZS92 163 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 IGKV1D-12P01611 117 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
CACNA1C-216ENST00000399638 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 FOXG1P55316 489 aaPredicted RBP8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 SRSF1Q07955 248 aaKnown RBP eCLIP8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 PMVKQ15126 192 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 MORN2Q502X0 79 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 BRWD3Q6RI45 1802 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 SERF1AO75920 110 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 PLA2G2AP14555 144 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 DPM2O94777 84 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 RNASE7Q9H1E1 156 aaKnown RBP8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 KNCNA6PVL3 124 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 TGFBR3LH3BV60 316 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 CRLF1O75462 422 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 LYPD3O95274 346 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 CTSGP08311 255 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 RNF126Q9BV68 326 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 COL4A5P29400 1685 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 OOSP1A8MZH6 123 aa8.97□□□□□ -0.97
CACNA1C-216ENST00000399638 TRBV24-1A0A075B6N3 115 aa8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 YPEL1O60688 119 aa8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 KLF5Q13887 457 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 YPEL2Q96QA6 119 aa8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 SRP19P09132 144 aaKnown RBP8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 ZFP36P26651 326 aaKnown RBP8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 KLF17Q5JT82 389 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 PLPPR1Q8TBJ4 325 aa8.96□□□□□ -0.97
CACNA1C-216ENST00000399638 C9JAW5 83 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 LYPD2Q6UXB3 125 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 CKAP5Q14008 2032 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 BUB1B-PAK6H3BSN5 160 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 IGFL4Q6B9Z1 124 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 MORN5Q5VZ52 161 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 VWCEQ96DN2 955 aa8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 DAZ1Q9NQZ3 744 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-216ENST00000399638 BDP1A6H8Y1 2624 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 TRBV25-1A0A075B6N4 114 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 A0A087WWL8 130 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 AMBPP02760 352 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 ANGP03950 147 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 SELLP14151 372 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 DSCR8Q96T75 97 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 OTOFQ9HC10 1997 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 LOC285556D6RIA3 1793 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 GFI1Q99684 422 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 CHAC1Q9BUX1 264 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 TM2D1Q9BX74 207 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHV2-70P01814 119 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 SUPT4H1P63272 117 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 IGLL5B9A064 214 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 C5orf64Q2M2E5 130 aa8.95□□□□□ -0.98
CACNA1C-216ENST00000399638 CCL24O00175 119 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 PIFOQ8TCI5 191 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 SCN8AQ9UQD0 1980 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 PDCD11Q14690 1871 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHG4P01861 327 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 PSG8Q9UQ74 426 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 NYNRINQ9P2P1 1898 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 A0A0A6YYD4 124 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 SPINK13Q1W4C9 94 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 FAM90A2PQ658T7 463 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 FANCD2OSQ96PS1 177 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 ARTNQ5T4W7 220 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 KLK9Q9UKQ9 250 aa8.94□□□□□ -0.98
CACNA1C-216ENST00000399638 DOCK10Q96BY6 2186 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 LCTP09848 1927 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 SOCS3O14543 225 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 GP9P14770 177 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 ATP5G3P48201 142 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 HEATR5BQ9P2D3 2071 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 HIGD1CA8MV81 97 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms