RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 LIME1Q9H400 295 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 OOSP1A8MZH6 123 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 D6R8Y8 96 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 CCL24O00175 119 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 NTF4P34130 210 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 RPL23P62829 140 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 DKK4Q9UBT3 224 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 PI4KAP42356 2102 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 IGKV1-39P01597 117 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 IGKV1D-39P04432 117 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 SS18Q15532 418 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 GGTLC1Q9BX51 225 aa11.12□□□□□ -0.63
CACNA1C-211ENST00000399617 IGKV2D-24A0A075B6R9 120 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 MMP23AO75900 390 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 TMEM86BQ8N661 226 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 SPRY2O43597 315 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 SPXQ9BT56 116 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 A0A1W2PPI3 338 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 DOCK9Q9BZ29 2069 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 NXPH4O95158 308 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 RNF126Q9BV68 326 aa11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 FNDC1Q4ZHG4 1894 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-211ENST00000399617 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 TEX36Q5VZQ5 186 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 LAMTOR3Q9UHA4 124 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 PFN2P35080 140 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 RNASE13Q5GAN3 156 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 SPCS1Q9Y6A9 102 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 ADORA2A-AS1P86434 159 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 VWC2LB2RUY7 222 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 TOMM40O96008 361 aa11.1□□□□□ -0.63
CACNA1C-211ENST00000399617 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 SHISA9B4DS77 424 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 PSG3Q16557 428 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 NOP10Q9NPE3 64 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 WDR81Q562E7 1941 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 MGAMO43451 1857 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 F6UB75 175 aa11.09□□□□□ -0.63
CACNA1C-211ENST00000399617 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.63
CACNA1C-211ENST00000399617 SMDT1Q9H4I9 107 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 A0A0G2JRQ6 117 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 WDR86Q86TI4 376 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 LMO1P25800 156 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 TRAV8-4A0A0B4J246 113 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 J3QLI3 93 aa11.08□□□□□ -0.64
CACNA1C-211ENST00000399617 F8WEM9 126 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 VWC2Q2TAL6 325 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 MEGF9Q9H1U4 602 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 NHP2Q9NX24 153 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 H0YIZ8 118 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 SERF1AO75920 110 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 PIFOQ8TCI5 191 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 LAGE3Q14657 143 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 CITED1Q99966 193 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 AKAP6Q13023 2319 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 VWA8A3KMH1 1905 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 ZNF524Q96C55 264 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 TRGV9Q99603 122 aa11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 CNOT1A5YKK6 2376 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-211ENST00000399617 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 C22orf46C9J442 243 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 IGHV3-30-3P0DP02 117 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 RNASE2P10153 161 aaKnown RBP11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 IGHV2-5P01817 119 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 ATP6V0BQ99437 205 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 FAM186AA6NE01 2351 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 NCOR1O75376 2440 aa11.06□□□□□ -0.64
CACNA1C-211ENST00000399617 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 F8W735 103 aaPredicted RBP11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 GP9P14770 177 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 C17orf58Q2M2W7 97 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 Q6AWC8 147 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 WISP2O76076 250 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 IGKCP01834 107 aa11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 SUPT4H1P63272 117 aaKnown RBP11.05□□□□□ -0.64
CACNA1C-211ENST00000399617 LINC00518Q8N0U6 118 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms