RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 NBR2O15453 112 aa11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 NDUFS7O75251 213 aa11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 FANCD2OSQ96PS1 177 aa11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
CCDC144A-205ENST00000399264 hDV102S1A0JD36 115 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 CHEK1O14757 476 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 TSPOP30536 169 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 HLA-DRB1P01911 266 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 BPIFA4PQ86YQ2 179 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 LY6G5BQ8NDX9 201 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 F8W735 103 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 H3BRN7 92 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 ZNF414Q96IQ9 312 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 PSG8Q9UQ74 426 aa11.41□□□□□ -0.58
CCDC144A-205ENST00000399264 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.58
CCDC144A-205ENST00000399264 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
CCDC144A-205ENST00000399264 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
CCDC144A-205ENST00000399264 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
CCDC144A-205ENST00000399264 LINC00614P0C842 121 aa11.4□□□□□ -0.59
CCDC144A-205ENST00000399264 FAM106CPP0CH98 169 aa11.4□□□□□ -0.59
CCDC144A-205ENST00000399264 PAX2Q02962 417 aa11.4□□□□□ -0.59
CCDC144A-205ENST00000399264 FAM106AQ4KMX7 169 aa11.4□□□□□ -0.59
CCDC144A-205ENST00000399264 CT83Q5H943 113 aa11.4□□□□□ -0.59
CCDC144A-205ENST00000399264 GNG7O60262 68 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 ADORA2A-AS1P86434 159 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 COL5A1-AS1Q5SY13 56 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 HLA-DMBP28068 263 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 C5orf64Q2M2E5 130 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 UNQ5815/PRO19632Q6UWF5 114 aa11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
CCDC144A-205ENST00000399264 CSMD2Q7Z408 3487 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 LEPROTL1O95214 131 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 FXYD7P58549 80 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 ERASQ7Z444 233 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 C1RLQ9NZP8 487 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 OR11H6Q8NGC7 330 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 GFRA4Q9GZZ7 299 aa11.38□□□□□ -0.59
CCDC144A-205ENST00000399264 LOC105371242A0A075B767 164 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 SYS1-DBNDD2H3BUS1 97 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 FOXE3Q13461 319 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 PSG3Q16557 428 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 C16orf54Q6UWD8 224 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 Q8TAT8 98 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 RAXQ9Y2V3 346 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 A0A1B0GUT8 65 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 TMEM213A2RRL7 107 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 HAX1O00165 279 aa11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 LOXL1Q08397 574 aaPredicted RBP11.37□□□□□ -0.59
CCDC144A-205ENST00000399264 WI2-2373I1.2A0A1W2PRP0 233 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 KLHDC1Q8N7A1 406 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 FLNCQ14315 2725 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 IGLV11-55A0A075B6I3 123 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 NDUFA3O95167 84 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 MRPL52Q86TS9 123 aaKnown RBP11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 NEU4Q8WWR8 484 aaPredicted RBP11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 RNF5Q99942 180 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 NPBQ8NG41 125 aa11.36□□□□□ -0.59
CCDC144A-205ENST00000399264 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 TMEM75Q8N9X5 138 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 ARPC1AQ92747 370 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 RAB1BQ9H0U4 201 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 CFAP46Q8IYW2 2715 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 SERTM2A0A1B0GWG4 89 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 PRTN3P24158 256 aa11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
CCDC144A-205ENST00000399264 IGHV3OR16-13A0A075B7E8 117 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 IGHV3-74A0A0B4J1X5 117 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 NCR2O95944 276 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 TCTAP57738 103 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 LYZL1Q6UWQ5 148 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 ZFP30Q9Y2G7 519 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 EGR2P11161 476 aaPredicted RBP11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 CHCHD1Q96BP2 118 aaKnown RBP11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 VGLL1Q99990 258 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 C21orf62Q9NYP8 219 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
CCDC144A-205ENST00000399264 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
CCDC144A-205ENST00000399264 SNAI2O43623 268 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms