RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CFDP00746 253 aaPredicted RBP6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 FCN2Q15485 313 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 C1orf134Q5TEV5 83 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 ACOT7LQ6ZUV0 252 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 BAP18Q8IXM2 172 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 SLC45A2Q9UMX9 530 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 TMED3Q9Y3Q3 217 aa6.91□□□□□ -1.3
NIFKP1-201ENST00000398317 LRP1BQ9NZR2 4599 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 TRAV12-2A0A075B6T6 113 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 SMCO3A2RU48 225 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 NOL3O60936 208 aaKnown RBP6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 INSP01308 110 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 AZU1P20160 251 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 AP3S2P59780 193 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 ZNF738Q8NE65 137 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 OR4D5Q8NGN0 318 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 SLC25A39Q9BZJ4 359 aaPredicted RBP6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 STRAPQ9Y3F4 350 aaKnown RBP6.9□□□□□ -1.3
NIFKP1-201ENST00000398317 H3BRN7 92 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 CCNKO75909 580 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 IL5P05113 134 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 POLR2GP62487 172 aaKnown RBP eCLIP6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 SOHLH1Q5JUK2 328 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 CYP2G1PQ6ZSU1 146 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 TMEM144Q7Z5S9 345 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 C15orf53Q8NAA6 179 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 GPR82Q96P67 336 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 SLC25A21Q9BQT8 299 aaPredicted RBP6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 ATG101Q9BSB4 218 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 SHANK2-AS3Q9BTD1 123 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 KRTAP4-5Q9BYR2 181 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 HIGD1AQ9Y241 93 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 V9GYH0 126 aa6.89□□□□□ -1.31
NIFKP1-201ENST00000398317 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 LYRM9A8MSI8 78 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 F5H768 121 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 BOLA2-SMG1P6H3BVE0 249 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 HYPMO75409 117 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 ADAP1O75689 374 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 NUDT3O95989 172 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 OR5G3P0C626 314 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 HTN1P15515 57 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 S100A7P31151 101 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 RAP2BP61225 183 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 RRAS2P62070 204 aaPredicted RBP6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 RHOBP62745 196 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 UHRF2Q96PU4 802 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 LINC01587Q99440 93 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 PSENENQ9NZ42 101 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
NIFKP1-201ENST00000398317 C9orf170A2RU37 121 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 PMS2P5A8MQ11 134 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 SSSCA1O60232 199 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 LINC00869P0C866 280 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 RPL7P18124 248 aaKnown RBP6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 B2MP61769 119 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 OR8A1Q8NGG7 326 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 PPP1R14DQ9NXH3 145 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 FLVCR2Q9UPI3 526 aa6.87□□□□□ -1.31
NIFKP1-201ENST00000398317 METTL15P1P0C7V9 234 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 CXCL3P19876 107 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 TSPOP30536 169 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 S100A5P33763 92 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 FAM3BP58499 235 aaPredicted RBP6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 PLP1P60201 277 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 PSG3Q16557 428 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 PATE2Q6UY27 113 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 ARL6Q9H0F7 186 aa6.86□□□□□ -1.31
NIFKP1-201ENST00000398317 A0A087X0K7 114 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 NBDYA0A0U1RRE5 68 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 CCDC160A6NGH7 325 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 CBY3A6NI87 242 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 SCGB1D2O95969 90 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 ATP5G1P05496 136 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 ANXA7P20073 488 aaKnown RBP6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 ATP5G3P48201 142 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 TAS2R60P59551 318 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 UBE2MP61081 183 aaKnown RBP6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 SELENOTP62341 195 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 SLC38A11Q08AI6 406 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 CCDC190Q86UF4 302 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 TMEM256Q8N2U0 113 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 DEDD2Q8WXF8 326 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 RPUSD4Q96CM3 377 aaKnown RBP6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 SMIM8Q96KF7 97 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 ARV1Q9H2C2 271 aa6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
NIFKP1-201ENST00000398317 LINC00588Q9Y4M8 146 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms