RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 IGHG3P01860 377 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 LYNX1P0DP58 116 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 CFHR2P36980 270 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 TEX29Q8N6K0 151 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 CHAC1Q9BUX1 264 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 K7EP13 123 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 RHOGP84095 191 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 TMEM158Q8WZ71 300 aa8.94□□□□□ -0.98
HPS4-202ENST00000398145 TRAV21A0A0B4J279 112 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 LY6G6EA0A0G2JKS1 128 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 IGLC7A0M8Q6 106 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 NDUFS8O00217 210 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 CCL25O15444 150 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 DKK1O94907 266 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 IGKV3-20P01619 116 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 PLNP26678 52 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 U3KQA8 63 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 POU2AF1Q16633 256 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 COPS9Q8WXC6 57 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 FAM168AQ92567 244 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 SHANK2-AS3Q9BTD1 123 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 H7C1H1 209 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 CRXO43186 299 aaPredicted RBP8.93□□□□□ -0.98
HPS4-202ENST00000398145 SNRPD3P62318 126 aaKnown RBP8.93□□□□□ -0.98
HPS4-202ENST00000398145 CD300EQ496F6 205 aaPredicted RBP8.93□□□□□ -0.98
HPS4-202ENST00000398145 DTX1Q86Y01 620 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 WIPF2Q8TF74 440 aaPredicted RBP8.93□□□□□ -0.98
HPS4-202ENST00000398145 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 PDE6HQ13956 83 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 C17orf58Q2M2W7 97 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 FAM104BQ5XKR9 115 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 DDB2Q92466 427 aa8.93□□□□□ -0.98
HPS4-202ENST00000398145 PCNX3Q9H6A9 2034 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 HAX1O00165 279 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 PAX1P15863 534 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 CDKN1BP46527 198 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 ADAMTSL5Q6ZMM2 481 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 RNASE4P34096 147 aaKnown RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 ASPHD1Q5U4P2 390 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 DYNLRB2Q8TF09 96 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 ARFGEF3Q5TH69 2177 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 TMEM213A2RRL7 107 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 LINC01549A6NIU2 74 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 CD59P13987 128 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 LY6EQ16553 131 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 TNCP24821 2201 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 IGHV2-70DA0A0C4DH43 119 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 MBD3L4A6NDZ8 208 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 MBD3L3A6NE82 208 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 MBD3L5A6NJ08 208 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 MBD3L2Q8NHZ7 208 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 NEU4Q8WWR8 484 aaPredicted RBP8.92□□□□□ -0.98
HPS4-202ENST00000398145 FXYD5Q96DB9 178 aa8.92□□□□□ -0.98
HPS4-202ENST00000398145 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
HPS4-202ENST00000398145 KLF5Q13887 457 aaPredicted RBP8.91□□□□□ -0.98
HPS4-202ENST00000398145 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
HPS4-202ENST00000398145 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
HPS4-202ENST00000398145 TMEM75Q8N9X5 138 aa8.91□□□□□ -0.98
HPS4-202ENST00000398145 DLX4Q92988 240 aaPredicted RBP8.91□□□□□ -0.98
HPS4-202ENST00000398145 DEFB125Q8N687 156 aa8.91□□□□□ -0.98
HPS4-202ENST00000398145 CKS1BP61024 79 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 TRBV19A0A075B6N1 114 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 SRRM4A7MD48 611 aaKnown RBP8.9□□□□□ -0.98
HPS4-202ENST00000398145 BUB1B-PAK6H3BSN5 160 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 TNFRSF6BO95407 300 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 GATA4P43694 442 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 ZNF474Q6S9Z5 364 aaPredicted RBP8.9□□□□□ -0.98
HPS4-202ENST00000398145 CLEC2AQ6UVW9 174 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 TNFRSF18Q9Y5U5 241 aa8.9□□□□□ -0.98
HPS4-202ENST00000398145 NUP210Q8TEM1 1887 aaPredicted RBP8.9□□□□□ -0.98
HPS4-202ENST00000398145 CEACAM8P31997 349 aaPredicted RBP8.9□□□□□ -0.99
HPS4-202ENST00000398145 C5orf64Q2M2E5 130 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 C15orf32Q32M92 178 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 ZNF833PQ6ZTB9 187 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 K7EP34 96 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 TSPAN13O95857 204 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 SUMO2P61956 95 aaKnown RBP8.9□□□□□ -0.99
HPS4-202ENST00000398145 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.99
HPS4-202ENST00000398145 PRSS46E5RG02 174 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 GLMPQ8WWB7 406 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 SRSF8Q9BRL6 282 aaKnown RBP8.89□□□□□ -0.99
HPS4-202ENST00000398145 IGHV3OR16-10A0A075B7F0 116 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 TRAV40A0A0B4J280 105 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 CD7P09564 240 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 LYPD2Q6UXB3 125 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 ZNF562Q6V9R5 426 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 NUP37Q8NFH4 326 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
HPS4-202ENST00000398145 PGPEP1Q9NXJ5 209 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 TRAV2A0A0B4J234 112 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 DNAL4O96015 105 aa8.89□□□□□ -0.99
HPS4-202ENST00000398145 DUX4L9Q6RFH8 374 aaPredicted RBP8.89□□□□□ -0.99
HPS4-202ENST00000398145 TTC28Q96AY4 2481 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms