RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GPR82Q96P67 336 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 VAX2Q9UIW0 290 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 VWFP04275 2813 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 TRBV19A0A075B6N1 114 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 C9JQL5 133 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 ZNF506Q5JVG8 444 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 SUN5Q8TC36 379 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 MLXQ9UH92 298 aa16.06■□□□□ 0.16
CPNE1-204ENST00000397443 M0QZ24 198 aa16.05■□□□□ 0.16
CPNE1-204ENST00000397443 SUMO1P63165 101 aaKnown RBP16.05■□□□□ 0.16
CPNE1-204ENST00000397443 MEF2BQ02080 365 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-204ENST00000397443 IGFL4Q6B9Z1 124 aa16.05■□□□□ 0.16
CPNE1-204ENST00000397443 C12orf54Q6X4T0 127 aa16.05■□□□□ 0.16
CPNE1-204ENST00000397443 TCF24Q7RTU0 167 aa16.05■□□□□ 0.16
CPNE1-204ENST00000397443 EXOC3-AS1Q8N2X6 119 aa16.05■□□□□ 0.16
CPNE1-204ENST00000397443 GGTLC3B5MD39 225 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 NDUFB4O95168 129 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 CSN3P07498 182 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 BMI1P35226 326 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 PEA15Q15121 130 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 GBGT1Q8N5D6 347 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 CD5P06127 495 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 CD81P60033 236 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 PMS2P11Q13670 270 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 Q9H3A6 140 aa16.04■□□□□ 0.16
CPNE1-204ENST00000397443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.03■□□□□ 0.16
CPNE1-204ENST00000397443 DYNLRB2Q8TF09 96 aa16.03■□□□□ 0.16
CPNE1-204ENST00000397443 RPH3ALQ9UNE2 315 aa16.03■□□□□ 0.16
CPNE1-204ENST00000397443 LURAP1LQ8IV03 231 aa16.02■□□□□ 0.16
CPNE1-204ENST00000397443 A0A1W2PRE2 83 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 PGPA6NDG6 321 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 HELTA6NFD8 242 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 TFPI2P48307 235 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 WFDC3Q8IUB2 231 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 ZNF747Q9BV97 191 aa16.02■□□□□ 0.15
CPNE1-204ENST00000397443 TRRAPQ9Y4A5 3859 aa16.01■□□□□ 0.15
CPNE1-204ENST00000397443 EIF4E3Q8N5X7 224 aaKnown RBP16.01■□□□□ 0.15
CPNE1-204ENST00000397443 NOTCH3Q9UM47 2321 aa16.01■□□□□ 0.15
CPNE1-204ENST00000397443 HLA-DMBP28068 263 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 UQCC3Q6UW78 93 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 RNF182Q8N6D2 247 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 A0A087X0K7 114 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 ATP6V1G1O75348 118 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 SAP30O75446 220 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 SLC25A5P05141 298 aaKnown RBP16■□□□□ 0.15
CPNE1-204ENST00000397443 TAGLN2P37802 199 aaKnown RBP16■□□□□ 0.15
CPNE1-204ENST00000397443 GNG5P63218 68 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 LINC00482Q8N8I6 264 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 CYB561D1Q8N8Q1 229 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 NRN1Q9NPD7 142 aa16■□□□□ 0.15
CPNE1-204ENST00000397443 SCO2A0A1W2PP80 73 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 SRP19P09132 144 aaKnown RBP15.99■□□□□ 0.15
CPNE1-204ENST00000397443 SFTA3P0C7M3 94 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 PDE6HQ13956 83 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 SPATA3Q8NHX4 192 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 C16orf92Q96LL3 132 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 AAMDCQ9H7C9 122 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 ARL2-SNX15V9GYD0 113 aa15.99■□□□□ 0.15
CPNE1-204ENST00000397443 M0R3E3 92 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 ZNF331Q9NQX6 463 aaPredicted RBP15.98■□□□□ 0.15
CPNE1-204ENST00000397443 SORL1Q92673 2214 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 FAM90A2PQ658T7 463 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 CCDC28AQ8IWP9 274 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 SLC35B3Q9H1N7 401 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 MS4A6AQ9H2W1 248 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 OTORQ9NRC9 128 aa15.98■□□□□ 0.15
CPNE1-204ENST00000397443 DNASE2O00115 360 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-204ENST00000397443 PSG9Q00887 426 aa15.97■□□□□ 0.15
CPNE1-204ENST00000397443 CMTM2Q8TAZ6 248 aa15.97■□□□□ 0.15
CPNE1-204ENST00000397443 RPUSD4Q96CM3 377 aaKnown RBP15.97■□□□□ 0.15
CPNE1-204ENST00000397443 PDE6DO43924 150 aa15.96■□□□□ 0.15
CPNE1-204ENST00000397443 ZNF674Q2M3X9 581 aa15.96■□□□□ 0.15
CPNE1-204ENST00000397443 DEFB114Q30KQ6 69 aa15.96■□□□□ 0.15
CPNE1-204ENST00000397443 CD300EQ496F6 205 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-204ENST00000397443 RBPMS2Q6ZRY4 209 aaKnown RBP15.96■□□□□ 0.15
CPNE1-204ENST00000397443 TMEM61Q8N0U2 210 aa15.96■□□□□ 0.15
CPNE1-204ENST00000397443 NKX6-2Q9C056 277 aaPredicted RBP15.96■□□□□ 0.15
CPNE1-204ENST00000397443 TRAV8-2A0A0B4J237 113 aa15.96■□□□□ 0.14
CPNE1-204ENST00000397443 ZNF705FA8MVS1 300 aaPredicted RBP15.96■□□□□ 0.14
CPNE1-204ENST00000397443 SHISA2Q6UWI4 295 aa15.96■□□□□ 0.14
CPNE1-204ENST00000397443 TXNDC17Q9BRA2 123 aa15.96■□□□□ 0.14
CPNE1-204ENST00000397443 DERL1Q9BUN8 251 aa15.96■□□□□ 0.14
CPNE1-204ENST00000397443 TMEM218A2RU14 115 aa15.95■□□□□ 0.14
CPNE1-204ENST00000397443 LYPD1Q8N2G4 141 aa15.95■□□□□ 0.14
CPNE1-204ENST00000397443 LINC00052Q96N35 136 aa15.95■□□□□ 0.14
CPNE1-204ENST00000397443 SLC50A1Q9BRV3 221 aa15.95■□□□□ 0.14
CPNE1-204ENST00000397443 MEOX2P50222 304 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 C5orf17Q8NAS9 161 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 SGK494Q96LW2 274 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 SMDT1Q9H4I9 107 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 EPDR1Q9UM22 224 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 IZUMO1RA6ND01 250 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 F6UZH7 168 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 ZNF253O75346 499 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 LINC00479Q96M42 142 aa15.94■□□□□ 0.14
CPNE1-204ENST00000397443 F8W036 122 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 SOCS3O14543 225 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 ADCYAP1P18509 176 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 SOHLH1Q5JUK2 328 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 FAM24BQ8N5W8 94 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms