RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNF709Q8N972 641 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 RFNGQ9Y644 331 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 DEFB4AO15263 64 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PRR20EP86478 221 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PRR20CP86479 221 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PRR20DP86480 221 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PRR20BP86481 221 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PRR20AP86496 221 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 IFITM3Q01628 133 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 ZNF738Q8NE65 137 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 IGF2BP2-AS1Q96M15 143 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 C17orf77Q96MU5 243 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 KCNIP2Q9NS61 270 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 PXMP4Q9Y6I8 212 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 HYDINQ4G0P3 5121 aa10.07□□□□□ -0.8
SEC13-204ENST00000397099 HBE1P02100 147 aa10.06□□□□□ -0.8
SEC13-204ENST00000397099 CXCL3P19876 107 aa10.06□□□□□ -0.8
SEC13-204ENST00000397099 PSG3Q16557 428 aa10.06□□□□□ -0.8
SEC13-204ENST00000397099 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
SEC13-204ENST00000397099 TMEM37Q8WXS4 190 aa10.06□□□□□ -0.8
SEC13-204ENST00000397099 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 UBE2L5PA0A1B0GUS4 154 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 IGSF23A1L1A6 192 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 F6UB75 175 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 MRPS12O15235 138 aaKnown RBP10.05□□□□□ -0.8
SEC13-204ENST00000397099 SSNA1O43805 119 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 INSP01308 110 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
SEC13-204ENST00000397099 OPCMLQ14982 345 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 TMEM208Q9BTX3 173 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 SLC35B3Q9H1N7 401 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 SLC39A9Q9NUM3 307 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
SEC13-204ENST00000397099 ZNF253O75346 499 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 FGF7P21781 194 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 RRN3P1Q2M238 152 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 AMTNQ6UX39 209 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 TMEM256Q8N2U0 113 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 OR11H7Q8NGC8 314 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
SEC13-204ENST00000397099 ZNF331Q9NQX6 463 aaPredicted RBP10.04□□□□□ -0.8
SEC13-204ENST00000397099 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 BOLA2-SMG1P6H3BVE0 249 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 IGLC2P0DOY2 106 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 FXYD7P58549 80 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 DEFB1P60022 68 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 RNF182Q8N6D2 247 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 OR5C1Q8NGR4 320 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 PPP1R1CQ8WVI7 109 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 RPUSD4Q96CM3 377 aaKnown RBP10.03□□□□□ -0.8
SEC13-204ENST00000397099 FAM210BQ96KR6 192 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 RNF126Q9BV68 326 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 NPCDR1Q9BY65 106 aa10.03□□□□□ -0.8
SEC13-204ENST00000397099 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
SEC13-204ENST00000397099 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 TSPOP30536 169 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 RHOBP62745 196 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 HIST1H1AQ02539 215 aaPredicted RBP10.02□□□□□ -0.81
SEC13-204ENST00000397099 PDE6HQ13956 83 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 OXA1LQ15070 435 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 Q6ZTC4 211 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 TMEM14CQ9P0S9 112 aa10.02□□□□□ -0.81
SEC13-204ENST00000397099 KMT2AQ03164 3969 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 DEFB131BA0A096LNP1 70 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 IGLL5B9A064 214 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 SIX6O95475 246 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 PTTG1O95997 202 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 CDKN1BP46527 198 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 H2BFSP57053 126 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 NHLH2Q02577 135 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 C12orf74Q32Q52 190 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 LRRC37A5PQ49AS3 106 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 C1orf158Q8N1D5 194 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
SEC13-204ENST00000397099 OR5AC2Q9NZP5 309 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 PRELID1Q9Y255 219 aa10.01□□□□□ -0.81
SEC13-204ENST00000397099 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
SEC13-204ENST00000397099 MPC2O95563 127 aa10□□□□□ -0.81
SEC13-204ENST00000397099 SPINK13Q1W4C9 94 aa10□□□□□ -0.81
SEC13-204ENST00000397099 IGFL4Q6B9Z1 124 aa10□□□□□ -0.81
SEC13-204ENST00000397099 SAT2Q96F10 170 aaPredicted RBP10□□□□□ -0.81
SEC13-204ENST00000397099 ODF3Q96PU9 254 aa10□□□□□ -0.81
SEC13-204ENST00000397099 NIPSNAP3BQ9BS92 247 aa10□□□□□ -0.81
SEC13-204ENST00000397099 MRPL32Q9BYC8 188 aaKnown RBP10□□□□□ -0.81
SEC13-204ENST00000397099 DKK2Q9UBU2 259 aa10□□□□□ -0.81
SEC13-204ENST00000397099 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
SEC13-204ENST00000397099 HIST1H1EP10412 219 aaKnown RBP9.99□□□□□ -0.81
SEC13-204ENST00000397099 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
SEC13-204ENST00000397099 ATP5SQ99766 215 aa9.99□□□□□ -0.81
SEC13-204ENST00000397099 NDUFAF3Q9BU61 184 aa9.99□□□□□ -0.81
SEC13-204ENST00000397099 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms