RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CLDN16Q9Y5I7 305 aa14.1□□□□□ -0.15
MCF2L-208ENST00000397030 TSSC4Q9Y5U2 329 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-208ENST00000397030 FBLIM1Q8WUP2 373 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 C5orf30Q96GV9 206 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 SEC11AP67812 179 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 DEFB113Q30KQ7 82 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 RPP25LQ8N5L8 163 aaKnown RBP14.09□□□□□ -0.15
MCF2L-208ENST00000397030 IGKV1-16P04430 117 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 SPOCK3Q9BQ16 436 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 MEGF9Q9H1U4 602 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 LIME1Q9H400 295 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 DOCK6Q96HP0 2047 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 NDUFB8O95169 186 aa14.09□□□□□ -0.15
MCF2L-208ENST00000397030 TMEM158Q8WZ71 300 aa14.08□□□□□ -0.15
MCF2L-208ENST00000397030 TRPT1Q86TN4 253 aaKnown RBP14.08□□□□□ -0.16
MCF2L-208ENST00000397030 HGFACQ04756 655 aa14.08□□□□□ -0.16
MCF2L-208ENST00000397030 NHLRC3Q5JS37 347 aa14.08□□□□□ -0.16
MCF2L-208ENST00000397030 GAGE2AQ6NT46 116 aa14.08□□□□□ -0.16
MCF2L-208ENST00000397030 NAA38Q9BRA0 125 aaKnown RBP14.08□□□□□ -0.16
MCF2L-208ENST00000397030 SBF2Q86WG5 1849 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 TRAV9-1A0A075B6T8 112 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 COL4A6Q14031 1691 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 DEFB112Q30KQ8 113 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 A8MWV9 139 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 AMBPP02760 352 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 ARMS2P0C7Q2 107 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 DUX4L9Q6RFH8 374 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-208ENST00000397030 KLHDC3Q9BQ90 382 aa14.07□□□□□ -0.16
MCF2L-208ENST00000397030 ATP6V0BQ99437 205 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 NOP10Q9NPE3 64 aaKnown RBP14.06□□□□□ -0.16
MCF2L-208ENST00000397030 TMEM242Q9NWH2 141 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 ZNF581Q9P0T4 197 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 B3GALT5-AS1P59052 145 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 H3BMM0 161 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 IGHV4-59P01825 116 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 UBE2WQ96B02 151 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 F8W735 103 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-208ENST00000397030 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
MCF2L-208ENST00000397030 CCL24O00175 119 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 TET1Q8NFU7 2136 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 TMEM243Q9BU79 118 aa14.06□□□□□ -0.16
MCF2L-208ENST00000397030 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-208ENST00000397030 CHCHD1Q96BP2 118 aaKnown RBP14.05□□□□□ -0.16
MCF2L-208ENST00000397030 SRSF3P84103 164 aaKnown RBP14.05□□□□□ -0.16
MCF2L-208ENST00000397030 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
MCF2L-208ENST00000397030 IGFBPL1Q8WX77 278 aa14.05□□□□□ -0.16
MCF2L-208ENST00000397030 WDR83OSQ9Y284 106 aa14.05□□□□□ -0.16
MCF2L-208ENST00000397030 A0A1B0GUS0 222 aa14.05□□□□□ -0.16
MCF2L-208ENST00000397030 Q6P435 159 aa14.05□□□□□ -0.16
MCF2L-208ENST00000397030 ESPL1Q14674 2120 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 RNF126Q9BV68 326 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 LYPD3O95274 346 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 C8orf86Q6ZUL3 223 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 PTPRFP10586 1907 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 C2orf82Q6UX34 121 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 ZNF479Q96JC4 524 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 RFNGQ9Y644 331 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 GRNP28799 593 aaKnown RBP14.04□□□□□ -0.16
MCF2L-208ENST00000397030 IFITM2Q01629 132 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 AMN1Q8IY45 258 aa14.04□□□□□ -0.16
MCF2L-208ENST00000397030 LINC00518Q8N0U6 118 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 NTF4P34130 210 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 ESM1Q9NQ30 184 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 DOCK4Q8N1I0 1966 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 NDUFS7O75251 213 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 RNASE13Q5GAN3 156 aaKnown RBP14.03□□□□□ -0.16
MCF2L-208ENST00000397030 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 SCRT2Q9NQ03 307 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 GNB1LQ9BYB4 327 aa14.03□□□□□ -0.16
MCF2L-208ENST00000397030 IGHV4-4A0A075B6R2 117 aa14.02□□□□□ -0.16
MCF2L-208ENST00000397030 IGHV1OR15-1A0A075B7D0 117 aa14.02□□□□□ -0.16
MCF2L-208ENST00000397030 RNF222A6NCQ9 220 aa14.02□□□□□ -0.16
MCF2L-208ENST00000397030 ZNF362Q5T0B9 420 aaPredicted RBP14.02□□□□□ -0.16
MCF2L-208ENST00000397030 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.16
MCF2L-208ENST00000397030 LRRC37A2A6NM11 1700 aa14.02□□□□□ -0.16
MCF2L-208ENST00000397030 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 IGHV3-30P01768 117 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 IGHV3-33P01772 117 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 IGHV3-30-3P0DP02 117 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 IGHV3-30-5P0DP03 117 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 RSPO3Q9BXY4 272 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-208ENST00000397030 TP53TG1Q9Y2A0 90 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 TEX48A0A1B0GUV7 120 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 SMIM2Q9BVW6 85 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 TNFRSF6BO95407 300 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 SAMD5Q5TGI4 173 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 TEX36Q5VZQ5 186 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 NEGR1Q7Z3B1 354 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 PIFOQ8TCI5 191 aa14.02□□□□□ -0.17
MCF2L-208ENST00000397030 A0A1W2PPI3 338 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 MTURNQ8N3F0 131 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 MMP23AO75900 390 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 OCIAD2Q56VL3 154 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 APRG1Q8IVJ8 170 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 XCL1P47992 114 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 AHCTF1Q8WYP5 2266 aa14.01□□□□□ -0.17
MCF2L-208ENST00000397030 NUP35Q8NFH5 326 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 ANAPC13Q9BS18 74 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms