RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NPPCP23582 126 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 USF2Q15853 346 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-202ENST00000396828 LCN15Q6UWW0 184 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 PATE2Q6UY27 113 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM61Q8N0U2 210 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 STXBP6Q8NFX7 210 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 PCNPQ8WW12 178 aaKnown RBP7.7□□□□□ -1.18
NEDD8-202ENST00000396828 UHRF2Q96PU4 802 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 SLC25A39Q9BZJ4 359 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-202ENST00000396828 HRH4Q9H3N8 390 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 LGALS9O00182 355 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 HMGB3O15347 200 aaKnown RBP7.69□□□□□ -1.18
NEDD8-202ENST00000396828 CXorf1O96002 111 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 STAG3L2P0CL84 134 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 STAG3L3P0CL85 134 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 ZNF726P1Q15940 193 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 TM4SF20Q53R12 229 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 C4orf48Q5BLP8 95 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 PQLC2Q6ZP29 291 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 MIR17HGQ75NE6 70 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 IQCF2Q8IXL9 164 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM190Q8WZ59 177 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 SHANK2-AS3Q9BTD1 123 aa7.69□□□□□ -1.18
NEDD8-202ENST00000396828 IGHV3OR16-8A0A075B7F1 116 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 A0A1B0GV50 99 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 A0A1W2PS18 150 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 H3BRN7 92 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 K7EMT4 169 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 OR7C2O60412 319 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 BMI1P35226 326 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 PPT1P50897 306 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 FGF8P55075 233 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-202ENST00000396828 SPATA31B1PQ5VZV4 182 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 SSX7Q7RTT5 188 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 LYPD6BQ8NI32 183 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 OVOL2Q9BRP0 275 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 SCRT1Q9BWW7 348 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 SLC25A2Q9BXI2 301 aa7.68□□□□□ -1.18
NEDD8-202ENST00000396828 DAZ1Q9NQZ3 744 aaKnown RBP7.68□□□□□ -1.18
NEDD8-202ENST00000396828 TRAV5A0A0B4J249 113 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 ZNF98A6NK75 572 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 IFNA1P01562 189 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 ARL14EPLP0DKL9 152 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
NEDD8-202ENST00000396828 CRYBB3P26998 211 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 PSMB3P49720 205 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 NDUFA5Q16718 116 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 C1orf194Q5T5A4 169 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 MORN5Q5VZ52 161 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 ZNF414Q96IQ9 312 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 GPR82Q96P67 336 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM231Q9H6L2 316 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM167BQ9NRX6 74 aa7.67□□□□□ -1.18
NEDD8-202ENST00000396828 A8MWP6 167 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 ZNF207O43670 478 aaKnown RBP7.66□□□□□ -1.18
NEDD8-202ENST00000396828 BUB3O43684 328 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 EIF3GO75821 320 aaKnown RBP eCLIP7.66□□□□□ -1.181e-7■■■■□ 19.4
NEDD8-202ENST00000396828 GCHFRP30047 84 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 UBE2L3P68036 154 aaKnown RBP7.66□□□□□ -1.18
NEDD8-202ENST00000396828 LEMD1Q68G75 181 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 OR8I2Q8N0Y5 310 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 FAM167A-AS1Q96KT0 104 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 MANBALQ9NQG1 85 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM14CQ9P0S9 112 aa7.66□□□□□ -1.18
NEDD8-202ENST00000396828 HECTD4Q9Y4D8 3996 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 IGHV7-4-1A0A0J9YVY3 117 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 LINC00862A6NCI5 91 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 OR10J4P0C629 311 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 TAGLN2P37802 199 aaKnown RBP7.65□□□□□ -1.18
NEDD8-202ENST00000396828 GALR1P47211 349 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 CCL20P78556 96 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 IL17DQ8TAD2 202 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 LINC00476Q8WZB0 136 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 MARC2Q969Z3 335 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 GNG13Q9P2W3 67 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 SMPXQ9UHP9 88 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 U3KQE9 123 aa7.65□□□□□ -1.18
NEDD8-202ENST00000396828 LOC102724200A0A096LPH7 203 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-202ENST00000396828 IGHV3-49A0A0A0MS15 119 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 IGHV3-66A0A0C4DH42 116 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 A0A0J9YWU9 116 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 HELTA6NFD8 242 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 PYYP10082 97 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 ATF4P18848 351 aaPredicted RBP7.64□□□□□ -1.19
NEDD8-202ENST00000396828 PMS2P11Q13670 270 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 GUK1Q16774 197 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 C16orf54Q6UWD8 224 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 COMMD7Q86VX2 200 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 FXYD5Q96DB9 178 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 ZNF503Q96F45 646 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 FAM210AQ96ND0 272 aa7.64□□□□□ -1.19
NEDD8-202ENST00000396828 RHPN1-AS1Q9BWJ2 59 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms