RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 OR10G7Q8NGN6 311 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 FAM167A-AS1Q96KT0 104 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 C20orf173Q96LM9 149 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 DNAH9Q9NYC9 4486 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 H3BTX0 84 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 BCL2L11O43521 198 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 MBP02144 154 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 PYYP10082 97 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 GUK1Q16774 197 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 ACTL10Q5JWF8 245 aa14.17□□□□□ -0.14
HOXA9-202ENST00000396345 A0A1W2PPV4 95 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 PFDN1O60925 122 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 HIST1H1EP10412 219 aaKnown RBP14.16□□□□□ -0.14
HOXA9-202ENST00000396345 APOC4P55056 127 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 TAS2R45P59539 299 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 CD300CQ08708 224 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 FAM122CQ6P4D5 195 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 RNF182Q8N6D2 247 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 HYLS1Q96M11 299 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 SLC50A1Q9BRV3 221 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 PAXXQ9BUH6 204 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 OR51M1Q9H341 326 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 RPRMQ9NS64 109 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 ZNF586Q9NXT0 402 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 AGRNO00468 2067 aa14.16□□□□□ -0.14
HOXA9-202ENST00000396345 COL7A1Q02388 2944 aa14.15□□□□□ -0.14
HOXA9-202ENST00000396345 LGALSLQ3ZCW2 172 aaPredicted RBP14.15□□□□□ -0.14
HOXA9-202ENST00000396345 ZNF471Q9BX82 626 aaPredicted RBP14.15□□□□□ -0.14
HOXA9-202ENST00000396345 ZNF331Q9NQX6 463 aaPredicted RBP14.15□□□□□ -0.14
HOXA9-202ENST00000396345 TRBV19A0A075B6N1 114 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 KIR2DL5BA0A0G2JN68 375 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 KIR2DL5BA0A0G2JPC4 375 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 SLC17A3O00476 420 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 OR7C2O60412 319 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 HLA-DMBP28068 263 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 DEFB1P60022 68 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 PSG3Q16557 428 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 KHDC3LQ587J8 217 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 TMEM41BQ5BJD5 291 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 FOXI2Q6ZQN5 318 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 TRPT1Q86TN4 253 aaKnown RBP14.14□□□□□ -0.15
HOXA9-202ENST00000396345 KIR2DL5AQ8N109 375 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 KIR2DL5BQ8NHK3 375 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 SAT2Q96F10 170 aaPredicted RBP14.14□□□□□ -0.15
HOXA9-202ENST00000396345 TM2D3Q9BRN9 247 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 SAV1Q9H4B6 383 aaPredicted RBP14.14□□□□□ -0.15
HOXA9-202ENST00000396345 ZMAT4Q9H898 229 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 NBEAL2Q6ZNJ1 2754 aa14.14□□□□□ -0.15
HOXA9-202ENST00000396345 H3BMM0 161 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 EIF3GO75821 320 aaKnown RBP eCLIP14.13□□□□□ -0.15
HOXA9-202ENST00000396345 OR10J4P0C629 311 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 HLA-DRB4P13762 266 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 CDC34P49427 236 aaPredicted RBP14.13□□□□□ -0.15
HOXA9-202ENST00000396345 GDF5OSQ5U4N7 250 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 EBLN2Q6P2I7 272 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 RPP25LQ8N5L8 163 aaKnown RBP14.13□□□□□ -0.15
HOXA9-202ENST00000396345 ZNF738Q8NE65 137 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 BLNKQ8WV28 456 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 RNF141Q8WVD5 230 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 SPATA25Q9BR10 227 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 CSTL1Q9H114 145 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 HLA-DRB4X5D2U9 266 aa14.13□□□□□ -0.15
HOXA9-202ENST00000396345 F6UB75 175 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 UBE2CO00762 179 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 ZNF253O75346 499 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 NBEAP1P0C6P0 100 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 SPP1P10451 314 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 EIF5AP63241 154 aaKnown RBP14.12□□□□□ -0.15
HOXA9-202ENST00000396345 PDE6HQ13956 83 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 ZFP69Q49AA0 526 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 FXYD5Q96DB9 178 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 ZNF503Q96F45 646 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 CLEC5AQ9NY25 188 aa14.12□□□□□ -0.15
HOXA9-202ENST00000396345 A0A0J9YX75 114 aa14.11□□□□□ -0.15
HOXA9-202ENST00000396345 HMGB3O15347 200 aaKnown RBP14.11□□□□□ -0.15
HOXA9-202ENST00000396345 PSG9Q00887 426 aa14.11□□□□□ -0.15
HOXA9-202ENST00000396345 AKR1C8PQ5T2L2 129 aa14.11□□□□□ -0.15
HOXA9-202ENST00000396345 RAB24Q969Q5 203 aa14.11□□□□□ -0.15
HOXA9-202ENST00000396345 ACTR3CQ9C0K3 210 aaPredicted RBP14.11□□□□□ -0.15
HOXA9-202ENST00000396345 NDUFB4O95168 129 aa14.1□□□□□ -0.15
HOXA9-202ENST00000396345 UBE2L3P68036 154 aaKnown RBP14.1□□□□□ -0.15
HOXA9-202ENST00000396345 MORN3Q6PF18 240 aaPredicted RBP14.1□□□□□ -0.15
HOXA9-202ENST00000396345 PQLC2Q6ZP29 291 aa14.1□□□□□ -0.15
HOXA9-202ENST00000396345 OR4B1Q8NGF8 309 aa14.1□□□□□ -0.15
HOXA9-202ENST00000396345 RPUSD4Q96CM3 377 aaKnown RBP14.1□□□□□ -0.15
HOXA9-202ENST00000396345 ZNF705FA8MVS1 300 aaPredicted RBP14.09□□□□□ -0.15
HOXA9-202ENST00000396345 IGKV3-20P01619 116 aa14.09□□□□□ -0.15
HOXA9-202ENST00000396345 STAG3L2P0CL84 134 aa14.09□□□□□ -0.15
HOXA9-202ENST00000396345 STAG3L3P0CL85 134 aa14.09□□□□□ -0.15
HOXA9-202ENST00000396345 TPT1P13693 172 aaKnown RBP14.09□□□□□ -0.15
HOXA9-202ENST00000396345 RETNQ9HD89 108 aa14.09□□□□□ -0.15
HOXA9-202ENST00000396345 DUSP14O95147 198 aaKnown RBP14.08□□□□□ -0.16
HOXA9-202ENST00000396345 CA1P00915 261 aaPredicted RBP14.08□□□□□ -0.16
HOXA9-202ENST00000396345 SEC11BP0C7V7 166 aa14.08□□□□□ -0.16
HOXA9-202ENST00000396345 Q6ZWC4 215 aa14.08□□□□□ -0.16
HOXA9-202ENST00000396345 BAP18Q8IXM2 172 aa14.08□□□□□ -0.16
HOXA9-202ENST00000396345 U3KQK5 164 aa14.08□□□□□ -0.16
HOXA9-202ENST00000396345 TENM3Q9P273 2699 aa14.08□□□□□ -0.16
HOXA9-202ENST00000396345 ZNF705DP0CH99 300 aaPredicted RBP14.07□□□□□ -0.16
HOXA9-202ENST00000396345 ZNF705BP0CI00 300 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms