RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 WI2-2373I1.2A0A1W2PRP0 233 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 IGHV4-59P01825 116 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 IER3P46695 156 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 TMEM183BQ1AE95 376 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 C9orf139Q6ZV77 190 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 Q6ZWC4 215 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 GGTLC3B5MD39 225 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 CTSGP08311 255 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 LINC00310P59036 64 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 SUMO1P63165 101 aaKnown RBP13.2□□□□□ -0.3
RDH13-202ENST00000396247 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
RDH13-202ENST00000396247 GP9P14770 177 aa13.19□□□□□ -0.3
RDH13-202ENST00000396247 BLCAPP62952 87 aa13.19□□□□□ -0.3
RDH13-202ENST00000396247 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
RDH13-202ENST00000396247 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 ISLRO14498 428 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 CRYBB3P26998 211 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 S100A7AQ86SG5 101 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 CHRDL1Q9BU40 450 aa13.18□□□□□ -0.3
RDH13-202ENST00000396247 H3BRN7 92 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 NBEAP1P0C6P0 100 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 GPR183P32249 361 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 CIARTQ8N365 385 aaPredicted RBP13.17□□□□□ -0.3
RDH13-202ENST00000396247 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 VAMP8Q9BV40 100 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
RDH13-202ENST00000396247 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 CLEC3BP05452 202 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 OR5I1Q13606 314 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
RDH13-202ENST00000396247 BLNKQ8WV28 456 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 ZNF586Q9NXT0 402 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 Q6ZS46 218 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 NAT8BQ9UHF3 227 aa13.16□□□□□ -0.3
RDH13-202ENST00000396247 ITPR3Q14573 2671 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 HLA-DQA1P01909 254 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 TRGV3P03979 118 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 PPIFP30405 207 aaKnown RBP13.15□□□□□ -0.3
RDH13-202ENST00000396247 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 Q6YL49 198 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 ZFHX3Q15911 3703 aa13.15□□□□□ -0.3
RDH13-202ENST00000396247 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
RDH13-202ENST00000396247 GPX1P07203 203 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 TMEM136Q6ZRR5 245 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 BPIFA4PQ86YQ2 179 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 FOXC2Q99958 501 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 ATG101Q9BSB4 218 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 GCN1Q92616 2671 aaKnown RBP13.14□□□□□ -0.31
RDH13-202ENST00000396247 UNC79Q9P2D8 2635 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 H3BUA1 57 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 BRI3O95415 125 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
RDH13-202ENST00000396247 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
RDH13-202ENST00000396247 MYCNOSP40205 109 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 VPREB3Q9UKI3 123 aa13.14□□□□□ -0.31
RDH13-202ENST00000396247 TEX15Q9BXT5 2789 aa13.13□□□□□ -0.31
RDH13-202ENST00000396247 IBA57Q5T440 356 aaKnown RBP13.13□□□□□ -0.31
RDH13-202ENST00000396247 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
RDH13-202ENST00000396247 IGF2BP2-AS1Q96M15 143 aa13.13□□□□□ -0.31
RDH13-202ENST00000396247 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
RDH13-202ENST00000396247 RASL11AQ6T310 242 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
RDH13-202ENST00000396247 ZNF580Q9UK33 172 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 PDZD2O15018 2839 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 H3BTX0 84 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 CD33P20138 364 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 RABAC1Q9UI14 185 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 CDC42EP3Q9UKI2 254 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
RDH13-202ENST00000396247 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 PGPA6NDG6 321 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 F2Z2F3 143 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 BMPR1BO00238 502 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 TEX29Q8N6K0 151 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 ZNF414Q96IQ9 312 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 PAM16Q9Y3D7 125 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 PEX7O00628 323 aa13.11□□□□□ -0.31
RDH13-202ENST00000396247 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
RDH13-202ENST00000396247 FRMD6-AS1P0C7T7 363 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms