RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CACNA1AO00555 2505 aa13.09□□□□□ -0.31
NUP50-202ENST00000396096 PIMREGQ9BSJ6 248 aa13.08□□□□□ -0.32
NUP50-202ENST00000396096 ALKBH7Q9BT30 221 aaPredicted RBP13.08□□□□□ -0.32
NUP50-202ENST00000396096 PKD1L2Q7Z442 2459 aa13.08□□□□□ -0.32
NUP50-202ENST00000396096 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
NUP50-202ENST00000396096 CAMPP49913 170 aa13.08□□□□□ -0.32
NUP50-202ENST00000396096 C1orf194Q5T5A4 169 aa13.08□□□□□ -0.32
NUP50-202ENST00000396096 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.32
NUP50-202ENST00000396096 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 NDUFS8O00217 210 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 ECSCRQ19T08 205 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 C15orf32Q32M92 178 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 TEX43Q6ZNM6 134 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 Q71RC1 249 aaPredicted RBP13.07□□□□□ -0.32
NUP50-202ENST00000396096 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 OR2D3Q8NGH3 330 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 PGLYRP4Q96LB8 373 aa13.07□□□□□ -0.32
NUP50-202ENST00000396096 M0R3E3 92 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 AMTP48728 403 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 RHOGP84095 191 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 COX8CQ7Z4L0 72 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 CCL19Q99731 98 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 SSBP4Q9BWG4 385 aaPredicted RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 FBLL1A6NHQ2 334 aaKnown RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 HAX1O00165 279 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
NUP50-202ENST00000396096 CSN1S1P47710 185 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 NDUFAF3Q9BU61 184 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 ZFAND3Q9H8U3 227 aa13.06□□□□□ -0.32
NUP50-202ENST00000396096 MED13LQ71F56 2210 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 IGHV4-61A0A0C4DH41 118 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 CD33P20138 364 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 RAB9AP51151 201 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 CRIP2P52943 208 aaPredicted RBP13.05□□□□□ -0.32
NUP50-202ENST00000396096 LURAP1LQ8IV03 231 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 SMAD5-AS1Q9Y6J3 95 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
NUP50-202ENST00000396096 GPR183P32249 361 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 TOMM20LQ6UXN7 152 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 NIT1Q86X76 327 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 SH2D7A6NKC9 451 aaPredicted RBP13.04□□□□□ -0.32
NUP50-202ENST00000396096 LINC01548A6NM66 108 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 CRIP1P50238 77 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 C19orf54Q5BKX5 351 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 MEGF9Q9H1U4 602 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
NUP50-202ENST00000396096 A0A087X0K7 114 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 G3V318 75 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 CLEC3BP05452 202 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 PMCHP20382 165 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 Q8N976 141 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 PIFOQ8TCI5 191 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 EEF1AKMT3Q96AZ1 226 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
NUP50-202ENST00000396096 TRBV7-1A0A0A6YYK4 115 aa13.02□□□□□ -0.32
NUP50-202ENST00000396096 Q6AWC8 147 aa13.02□□□□□ -0.32
NUP50-202ENST00000396096 A0A1B0GW15 77 aa13.02□□□□□ -0.33
NUP50-202ENST00000396096 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
NUP50-202ENST00000396096 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
NUP50-202ENST00000396096 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
NUP50-202ENST00000396096 C20orf144Q9BQM9 153 aa13.02□□□□□ -0.33
NUP50-202ENST00000396096 A0A1B0GUT8 65 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 CHEK1O14757 476 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 BUB3O43684 328 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 IGHG4P01861 327 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 C8orf49Q96NF6 230 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 NDFIP1Q9BT67 221 aa13.01□□□□□ -0.33
NUP50-202ENST00000396096 LOC102724200A0A096LPH7 203 aaPredicted RBP13□□□□□ -0.33
NUP50-202ENST00000396096 CLPSL1A2RUU4 121 aa13□□□□□ -0.33
NUP50-202ENST00000396096 KRTDAPP60985 99 aa13□□□□□ -0.33
NUP50-202ENST00000396096 RIGQ13278 110 aa13□□□□□ -0.33
NUP50-202ENST00000396096 SPOCK3Q9BQ16 436 aa13□□□□□ -0.33
NUP50-202ENST00000396096 AKAP6Q13023 2319 aa13□□□□□ -0.33
NUP50-202ENST00000396096 LBHQ53QV2 105 aaPredicted RBP12.99□□□□□ -0.33
NUP50-202ENST00000396096 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 ASCL2Q99929 193 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 IGKV2-40A0A087WW87 121 aaPredicted RBP12.99□□□□□ -0.33
NUP50-202ENST00000396096 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 TRAV40A0A0B4J280 105 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 HSBP1O75506 76 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 IGKV2D-40P01614 121 aaPredicted RBP12.99□□□□□ -0.33
NUP50-202ENST00000396096 ATP5J2P56134 94 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 CLEC19AQ6UXS0 136 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 TMEM219Q86XT9 240 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 URB1-AS1Q96HZ7 61 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 PRR25Q96S07 402 aa12.99□□□□□ -0.33
NUP50-202ENST00000396096 IGHV3OR16-10A0A075B7F0 116 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms