RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 GSKIPQ9P0R6 139 aa9.62□□□□□ -0.87
SCAF11-203ENST00000395453 A0A087X0K7 114 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
SCAF11-203ENST00000395453 CRXO43186 299 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-203ENST00000395453 HBE1P02100 147 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 OR5G3P0C626 314 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 P0DMU3 169 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 FAM231AP0DMU4 169 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 FAM231CP0DMU5 169 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 CNN1P51911 297 aaKnown RBP9.61□□□□□ -0.87
SCAF11-203ENST00000395453 RRN3P1Q2M238 152 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 S100A7AQ86SG5 101 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 RNF182Q8N6D2 247 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 UHRF2Q96PU4 802 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 GGACTQ9BVM4 153 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 C20orf85Q9H1P6 137 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 NDUFA13Q9P0J0 144 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 HSPG2P98160 4391 aa9.61□□□□□ -0.87
SCAF11-203ENST00000395453 LYRM1O43325 122 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 SCGB1D2O95969 90 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 TCRBP04435 133 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 CXCL3P19876 107 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 ARL6Q9H0F7 186 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 MGAT4CQ9UBM8 478 aa9.6□□□□□ -0.87
SCAF11-203ENST00000395453 YTHDF2Q9Y5A9 579 aaKnown RBP9.6□□□□□ -0.87
SCAF11-203ENST00000395453 M0R2Z0 102 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 AGPAT2O15120 278 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 FGL1Q08830 312 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 SLC38A11Q08AI6 406 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 PSG3Q16557 428 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 ARV1Q9H2C2 271 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
SCAF11-203ENST00000395453 M0R2N4 97 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 GOSR2O14653 212 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 B2MP61769 119 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF546Q86UE3 836 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF738Q8NE65 137 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
SCAF11-203ENST00000395453 FAM229AH3BQW9 127 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 CCSO14618 274 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 INSP01308 110 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 PRM2P04554 102 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 TSPOP30536 169 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF431Q8TF32 576 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-203ENST00000395453 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 MGST2Q99735 147 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 TMEM208Q9BTX3 173 aa9.57□□□□□ -0.88
SCAF11-203ENST00000395453 TRAV6A0A075B6T7 132 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF705GA8MUZ8 300 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-203ENST00000395453 BOLA2-SMG1P6H3BVE0 249 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 CXCL2P19875 107 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 DAD1P61803 113 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 IL15RAQ13261 267 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF846Q147U1 533 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 BAP18Q8IXM2 172 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 SEC22CQ9BRL7 303 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 CCDC32Q9BV29 185 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 ZNF331Q9NQX6 463 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-203ENST00000395453 NUDT15Q9NV35 164 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 PLAC8L1A1L4L8 177 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 LYRM9A8MSI8 78 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 L7N2F9 121 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 VAMP2P63027 116 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 HIST1H1AQ02539 215 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-203ENST00000395453 MORN5Q5VZ52 161 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 LCN15Q6UWW0 184 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 LINC00299Q6ZSB3 139 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 BPIFA4PQ86YQ2 179 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 C12orf45Q8N5I9 185 aaPredicted RBP9.56□□□□□ -0.88
SCAF11-203ENST00000395453 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 RPUSD4Q96CM3 377 aaKnown RBP9.56□□□□□ -0.88
SCAF11-203ENST00000395453 C2orf50Q96LR7 162 aa9.56□□□□□ -0.88
SCAF11-203ENST00000395453 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 C5orf51A6NDU8 294 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 FAM25EA8MYX2 175 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 AZU1P20160 251 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 VWC2Q2TAL6 325 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 RNF212Q495C1 297 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 SOHLH1Q5JUK2 328 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 SAT2Q96F10 170 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-203ENST00000395453 SLC50A1Q9BRV3 221 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 DNAJC4Q9NNZ3 241 aa9.55□□□□□ -0.88
SCAF11-203ENST00000395453 LSM5Q9Y4Y9 91 aaKnown RBP9.55□□□□□ -0.88
SCAF11-203ENST00000395453 FAM24AA6NFZ4 105 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 COX7A2P2O60397 106 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 CDK2AP2O75956 126 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 CST7O76096 145 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms