RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TMUB1Q9BVT8 246 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 TMEM191AQ9H0A3 160 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 NGBQ9NPG2 151 aa14.5□□□□□ -0.09
PCDHA1-202ENST00000394633 ARMS2P0C7Q2 107 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 PRB4P10163 310 aaPredicted RBP14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 COX7A1P24310 79 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 MCRIP2Q9BUT9 160 aaKnown RBP14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 USP9XQ93008 2570 aaPredicted RBP14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 TRBV19A0A075B6N1 114 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 LYNX1G3V0Z9 82 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 LYNX1P0DP58 116 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 HTR1DP28221 377 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 FBXL19-AS1Q494R0 122 aa14.49□□□□□ -0.09
PCDHA1-202ENST00000394633 A0A1B0GUT8 65 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 CSN3P07498 182 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 MPV17L2Q567V2 206 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 PET117Q6UWS5 81 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 TMEM75Q8N9X5 138 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 BBC3Q96PG8 261 aaPredicted RBP14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 SHANK2-AS3Q9BTD1 123 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 MAP1LC3CQ9BXW4 147 aa14.48□□□□□ -0.09
PCDHA1-202ENST00000394633 H3BRN7 92 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 K7EIM0 57 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 SIGLEC15Q6ZMC9 328 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 RPEQ96AT9 228 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 PRB1P04280 392 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 PLGLAQ15195 96 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 BPIFA4PQ86YQ2 179 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 GATD1Q8NB37 220 aa14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 NEU4Q8WWR8 484 aaPredicted RBP14.47□□□□□ -0.09
PCDHA1-202ENST00000394633 SCRT2Q9NQ03 307 aa14.46□□□□□ -0.09
PCDHA1-202ENST00000394633 PSG8Q9UQ74 426 aa14.46□□□□□ -0.09
PCDHA1-202ENST00000394633 CRIP1P50238 77 aa14.46□□□□□ -0.1
PCDHA1-202ENST00000394633 RIGQ13278 110 aa14.46□□□□□ -0.1
PCDHA1-202ENST00000394633 SLC25A34Q6PIV7 304 aa14.46□□□□□ -0.1
PCDHA1-202ENST00000394633 HSPB8Q9UJY1 196 aa14.46□□□□□ -0.1
PCDHA1-202ENST00000394633 LY6LH3BQJ8 138 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 HLA-DRB1P01911 266 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 APOBEC3AP31941 199 aaPredicted RBP14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 PPIAL4CA0A0B4J2A2 164 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 HSBP1L1C9JCN9 74 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 H0Y8G0 127 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 MRPS12O15235 138 aaKnown RBP14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 PPIAL4GP0DN37 164 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 PSG3Q16557 428 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 FBLN7Q53RD9 439 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 LDLRAD2Q5SZI1 272 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 ZNF491Q8N8L2 437 aa14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 RNASE8Q8TDE3 154 aaKnown RBP14.45□□□□□ -0.1
PCDHA1-202ENST00000394633 UTP20O75691 2785 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 LOC105371242A0A075B767 164 aa14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 CNIH1O95406 144 aa14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 NUDT3O95989 172 aa14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 RNF5Q99942 180 aa14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 PMCHL2Q9BQD1 86 aa14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 SRSF8Q9BRL6 282 aaKnown RBP14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 TIMM8BQ9Y5J9 83 aaPredicted RBP14.44□□□□□ -0.1
PCDHA1-202ENST00000394633 IGHV2-70DA0A0C4DH43 119 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 BVES-AS1Q5T3Y7 98 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 LINC01545Q5VT33 79 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 LYPD1Q8N2G4 141 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 RNF24Q9Y225 148 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 B9A039 149 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 RNF125Q96EQ8 232 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 ZNF414Q96IQ9 312 aa14.43□□□□□ -0.1
PCDHA1-202ENST00000394633 CHD6Q8TD26 2715 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 K7EQM0 130 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 M0R3E3 92 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 TAX1BP3O14907 124 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 TIMM23O14925 209 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 IL4P05112 153 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 TMEM190Q8WZ59 177 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 MS4A6AQ9H2W1 248 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 AP5S1Q9NUS5 200 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 ERASQ7Z444 233 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 BCL6BQ8N143 479 aaPredicted RBP14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 C8orf49Q96NF6 230 aa14.42□□□□□ -0.1
PCDHA1-202ENST00000394633 FCGR2BP31994 310 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 ZNF747Q9BV97 191 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 S4R3C0 116 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 CRYBG3Q68DQ2 2970 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 A0A1B0GW15 77 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 WI2-2373I1.2A0A1W2PRP0 233 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 ITLN2Q8WWU7 325 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 IGFBPL1Q8WX77 278 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 TPPP3Q9BW30 176 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 ASH1LQ9NR48 2969 aaKnown RBP14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 DOPEY1Q5JWR5 2465 aa14.41□□□□□ -0.1
PCDHA1-202ENST00000394633 MUC21A0A0G2JKD1 596 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 MUC21A0A140T8X8 626 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 K7EP13 123 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 CD3EP07766 207 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 KLF17Q5JT82 389 aaPredicted RBP14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 MUC21Q5SSG8 566 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 ONECUT1Q9UBC0 465 aa14.4□□□□□ -0.1
PCDHA1-202ENST00000394633 NCR2O95944 276 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 FAM106CPP0CH98 169 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 FAM106AQ4KMX7 169 aa14.39□□□□□ -0.11
PCDHA1-202ENST00000394633 Q6AWC8 147 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms