RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 A0A087X0K7 114 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 HELTA6NFD8 242 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 NDUFB4O95168 129 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 RPL11P62913 178 aaKnown RBP18.34■□□□□ 0.53
LRFN4-202ENST00000393952 ZNF506Q5JVG8 444 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 CST9LP1Q5W188 147 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 RAB19A4D1S5 217 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 RANP62826 216 aaKnown RBP18.34■□□□□ 0.53
LRFN4-202ENST00000393952 ICAM4Q14773 271 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 FAM90A2PQ658T7 463 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 RXFP4Q8TDU9 374 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 VAX2Q9UIW0 290 aa18.34■□□□□ 0.53
LRFN4-202ENST00000393952 VWFP04275 2813 aa18.33■□□□□ 0.52
LRFN4-202ENST00000393952 IGKV3-7A0A075B6H7 116 aa18.33■□□□□ 0.52
LRFN4-202ENST00000393952 ATP5G3P48201 142 aa18.33■□□□□ 0.52
LRFN4-202ENST00000393952 NDUFA5Q16718 116 aa18.33■□□□□ 0.52
LRFN4-202ENST00000393952 DYNLRB2Q8TF09 96 aa18.33■□□□□ 0.52
LRFN4-202ENST00000393952 A0A1W2PRE2 83 aa18.32■□□□□ 0.52
LRFN4-202ENST00000393952 GGTLC3B5MD39 225 aa18.32■□□□□ 0.52
LRFN4-202ENST00000393952 SPATA3Q8NHX4 192 aa18.32■□□□□ 0.52
LRFN4-202ENST00000393952 ARL2-SNX15V9GYD0 113 aa18.32■□□□□ 0.52
LRFN4-202ENST00000393952 PDE6HQ13956 83 aa18.31■□□□□ 0.52
LRFN4-202ENST00000393952 Q9H3A6 140 aa18.31■□□□□ 0.52
LRFN4-202ENST00000393952 SIGLEC8Q9NYZ4 499 aa18.31■□□□□ 0.52
LRFN4-202ENST00000393952 C11orf94C9JXX5 98 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 TAGLN2P37802 199 aaKnown RBP18.3■□□□□ 0.52
LRFN4-202ENST00000393952 MEF2BQ02080 365 aaPredicted RBP18.3■□□□□ 0.52
LRFN4-202ENST00000393952 DEFB114Q30KQ6 69 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 GBGT1Q8N5D6 347 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 MDFIQ99750 246 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 NRN1Q9NPD7 142 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 SAP30O75446 220 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 CD5P06127 495 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 CD81P60033 236 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 SUMO1P63165 101 aaKnown RBP18.3■□□□□ 0.52
LRFN4-202ENST00000393952 EXOC3-AS1Q8N2X6 119 aa18.3■□□□□ 0.52
LRFN4-202ENST00000393952 C9JQL5 133 aa18.29■□□□□ 0.52
LRFN4-202ENST00000393952 ZNF253O75346 499 aa18.29■□□□□ 0.52
LRFN4-202ENST00000393952 MEOX2P50222 304 aa18.29■□□□□ 0.52
LRFN4-202ENST00000393952 PEA15Q15121 130 aa18.29■□□□□ 0.52
LRFN4-202ENST00000393952 IGFL4Q6B9Z1 124 aa18.29■□□□□ 0.52
LRFN4-202ENST00000393952 PGPA6NDG6 321 aa18.28■□□□□ 0.52
LRFN4-202ENST00000393952 PSG9Q00887 426 aa18.28■□□□□ 0.52
LRFN4-202ENST00000393952 TMEM61Q8N0U2 210 aa18.28■□□□□ 0.52
LRFN4-202ENST00000393952 EIF4E3Q8N5X7 224 aaKnown RBP18.28■□□□□ 0.52
LRFN4-202ENST00000393952 TREM1Q9NP99 234 aa18.28■□□□□ 0.52
LRFN4-202ENST00000393952 ZNF331Q9NQX6 463 aaPredicted RBP18.28■□□□□ 0.52
LRFN4-202ENST00000393952 OTORQ9NRC9 128 aa18.28■□□□□ 0.52
LRFN4-202ENST00000393952 HLA-DMBP28068 263 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 CD300EQ496F6 205 aaPredicted RBP18.27■□□□□ 0.52
LRFN4-202ENST00000393952 CCDC28AQ8IWP9 274 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 LYPD1Q8N2G4 141 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 CITED4Q96RK1 184 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 SLC50A1Q9BRV3 221 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 MS4A6AQ9H2W1 248 aa18.27■□□□□ 0.52
LRFN4-202ENST00000393952 TRAV8-2A0A0B4J237 113 aa18.26■□□□□ 0.51
LRFN4-202ENST00000393952 SOCS3O14543 225 aa18.26■□□□□ 0.51
LRFN4-202ENST00000393952 TFPI2P48307 235 aa18.26■□□□□ 0.51
LRFN4-202ENST00000393952 WFDC3Q8IUB2 231 aa18.26■□□□□ 0.51
LRFN4-202ENST00000393952 C16orf92Q96LL3 132 aa18.26■□□□□ 0.51
LRFN4-202ENST00000393952 NKX6-2Q9C056 277 aaPredicted RBP18.26■□□□□ 0.51
LRFN4-202ENST00000393952 UQCC3Q6UW78 93 aa18.25■□□□□ 0.51
LRFN4-202ENST00000393952 RBPMS2Q6ZRY4 209 aaKnown RBP18.25■□□□□ 0.51
LRFN4-202ENST00000393952 TXNDC17Q9BRA2 123 aa18.25■□□□□ 0.51
LRFN4-202ENST00000393952 AAMDCQ9H7C9 122 aa18.25■□□□□ 0.51
LRFN4-202ENST00000393952 SRP19P09132 144 aaKnown RBP18.25■□□□□ 0.51
LRFN4-202ENST00000393952 RNF182Q8N6D2 247 aa18.25■□□□□ 0.51
LRFN4-202ENST00000393952 DCANP1Q8TF63 244 aa18.25■□□□□ 0.51
LRFN4-202ENST00000393952 M0R3E3 92 aa18.24■□□□□ 0.51
LRFN4-202ENST00000393952 DNASE2O00115 360 aaPredicted RBP18.24■□□□□ 0.51
LRFN4-202ENST00000393952 SLC25A5P05141 298 aaKnown RBP18.24■□□□□ 0.51
LRFN4-202ENST00000393952 GNG5P63218 68 aa18.24■□□□□ 0.51
LRFN4-202ENST00000393952 SMDT1Q9H4I9 107 aa18.24■□□□□ 0.51
LRFN4-202ENST00000393952 SCO2A0A1W2PP80 73 aa18.23■□□□□ 0.51
LRFN4-202ENST00000393952 IZUMO1RA6ND01 250 aa18.23■□□□□ 0.51
LRFN4-202ENST00000393952 TSPAN4O14817 238 aa18.23■□□□□ 0.51
LRFN4-202ENST00000393952 PRB4P10163 310 aaPredicted RBP18.23■□□□□ 0.51
LRFN4-202ENST00000393952 CD33P20138 364 aa18.23■□□□□ 0.51
LRFN4-202ENST00000393952 K7EQG2 157 aa18.22■□□□□ 0.51
LRFN4-202ENST00000393952 IGLV1-51P01701 117 aa18.22■□□□□ 0.51
LRFN4-202ENST00000393952 RIPPLY3P57055 190 aa18.22■□□□□ 0.51
LRFN4-202ENST00000393952 C5orf17Q8NAS9 161 aa18.22■□□□□ 0.51
LRFN4-202ENST00000393952 RPH3ALQ9UNE2 315 aa18.22■□□□□ 0.51
LRFN4-202ENST00000393952 TRAV25A0A0B4J276 109 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 F6UZH7 168 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 ISLRO14498 428 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 PDE6DO43924 150 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 PAFAH1B2P68402 229 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 CYB561D1Q8N8Q1 229 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 WFDC9Q8NEX5 89 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 CMTM2Q8TAZ6 248 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 C20orf173Q96LM9 149 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 CEBPGP53567 150 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 FAM24BQ8N5W8 94 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 SLC35B3Q9H1N7 401 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 EPDR1Q9UM22 224 aa18.21■□□□□ 0.51
LRFN4-202ENST00000393952 ZNF705FA8MVS1 300 aaPredicted RBP18.2■□□□□ 0.5
LRFN4-202ENST00000393952 SAMD13Q5VXD3 122 aa18.2■□□□□ 0.5
LRFN4-202ENST00000393952 TRRAPQ9Y4A5 3859 aa18.19■□□□□ 0.5
LRFN4-202ENST00000393952 TMEM250H0YL14 139 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms