RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 WDR31Q8NA23 367 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 GATD1Q8NB37 220 aa6.19□□□□□ -1.42
VTI1A-201ENST00000393077 LOC107984640A0A0U1RRK4 108 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 J3QT63 122 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 NDUFS7O75251 213 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 ARMS2P0C7Q2 107 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 LINC01559Q495D7 138 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 TMEM42Q69YG0 159 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 MDP1Q86V88 176 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 LRRC75A-AS1Q8N1F1 130 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 SPANXDQ9BXN6 97 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 PCNX1Q96RV3 2341 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 LINC00305Q7Z4B0 112 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 CALYQ9NYX4 217 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 KLF13Q9Y2Y9 288 aaPredicted RBP6.18□□□□□ -1.42
VTI1A-201ENST00000393077 BRI3O95415 125 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 THBDP07204 575 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 RND1Q92730 232 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 TANC2Q9HCD6 1990 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 OBSL1O75147 1896 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 IGKV3D-11A0A0A0MRZ8 115 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 LYZP61626 148 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 CT83Q5H943 113 aa6.18□□□□□ -1.42
VTI1A-201ENST00000393077 NDUFA7O95182 113 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 CD7P09564 240 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 FGF6P10767 208 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 TMEM78Q5T7P6 136 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 CFAP126Q5VTH2 177 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 C21orf62Q9NYP8 219 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 A0A0C4DFX4 3053 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 IGHV3-48P01763 117 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 TNFRSF1AP19438 455 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 LOXL3P58215 753 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 V9GYY9 64 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 A0A087WX48 190 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 PCNX2A6NKB5 2137 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
VTI1A-201ENST00000393077 PLNP26678 52 aa6.17□□□□□ -1.42
VTI1A-201ENST00000393077 SPTBN1Q01082 2364 aaKnown RBP6.17□□□□□ -1.42
VTI1A-201ENST00000393077 ZNHIT1O43257 154 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 HLA-DRB4P13762 266 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 C3orf36Q3SXR2 165 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 CXorf67Q86X51 503 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-201ENST00000393077 PRR7Q8TB68 274 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 ASCL2Q99929 193 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 HLA-DRB4X5D2U9 266 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 PRRG2O14669 202 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 GFRA3O60609 400 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 SRD5A1P18405 259 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 C20orf204Q6ZNR8 217 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 C17orf82Q86X59 251 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-201ENST00000393077 ZNF524Q96C55 264 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 SCGB3A1Q96QR1 104 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 PLXNA2O75051 1894 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 IGHV1-45A0A0A0MS14 117 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 HAX1O00165 279 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 UQCRQO14949 82 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 CD3EP07766 207 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 TMEM158Q8WZ71 300 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 SPRY4Q9C004 299 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 UNC80Q8N2C7 3258 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 AGRNO00468 2067 aa6.16□□□□□ -1.42
VTI1A-201ENST00000393077 FAM90A9PA6NNJ1 464 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 C12orf77C9JDV5 145 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 MAGEA5P43359 124 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 ZNF329Q86UD4 541 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 FGFBP3Q8TAT2 258 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 IFI27L2Q9H2X8 130 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 Q9H3A6 140 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.42
VTI1A-201ENST00000393077 CDX4O14627 284 aaPredicted RBP6.15□□□□□ -1.42
VTI1A-201ENST00000393077 LIFP15018 202 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 MEOX1P50221 254 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 PCOLCEQ15113 449 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 FAM120AOSQ5T036 256 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 C10orf128Q5T292 105 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 ATP1A1-AS1Q5TC04 95 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 ZFP2Q6ZN57 461 aa6.15□□□□□ -1.42
VTI1A-201ENST00000393077 PMS2P5A8MQ11 134 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 OOSP1A8MZH6 123 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 DUSP14O95147 198 aaKnown RBP6.15□□□□□ -1.43
VTI1A-201ENST00000393077 RBP4P02753 201 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 MYOD1P15172 320 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 DIAPH2-AS1Q14236 149 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 LTBP2Q14767 1821 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 C2orf16Q68DN1 1984 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 USP34Q70CQ2 3546 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 TMEM219Q86XT9 240 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 WNK2Q9Y3S1 2297 aa6.15□□□□□ -1.43
VTI1A-201ENST00000393077 TRGV5A0A0B4J1U4 118 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 IGLC6P0CF74 106 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 C3orf22Q8N5N4 141 aa6.14□□□□□ -1.43
VTI1A-201ENST00000393077 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms