RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 PRORYQ9H606 182 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 CBY3A6NI87 242 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
SNX9-201ENST00000392185 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 SHANK2-AS3Q9BTD1 123 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 FCN3O75636 299 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 SERF1AO75920 110 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 EMP1P54849 157 aa13.14□□□□□ -0.31
SNX9-201ENST00000392185 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 SRSF8Q9BRL6 282 aaKnown RBP13.13□□□□□ -0.31
SNX9-201ENST00000392185 APOHP02749 345 aaPredicted RBP13.13□□□□□ -0.31
SNX9-201ENST00000392185 OR10AG1Q8NH19 301 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 ZNF502Q8TBZ5 544 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 LINC01587Q99440 93 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 TRBV24-1A0A075B6N3 115 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 IFITM10A6NMD0 228 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
SNX9-201ENST00000392185 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 USMG5Q96IX5 58 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 DOPEY1Q5JWR5 2465 aa13.13□□□□□ -0.31
SNX9-201ENST00000392185 IGHV4-59P01825 116 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 IGLC1P0CG04 106 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 LINC00518Q8N0U6 118 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 OR11H6Q8NGC7 330 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
SNX9-201ENST00000392185 GGTLC3B5MD39 225 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 DTX2Q86UW9 622 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 JKAMPQ9P055 326 aa13.12□□□□□ -0.31
SNX9-201ENST00000392185 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 JMJD8Q96S16 334 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 H3BVH4 76 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 IGLV1-47P01700 117 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 CDSNQ15517 529 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
SNX9-201ENST00000392185 E7EUB6 86 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 HOXA5P20719 270 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 TMEM95Q3KNT9 176 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 Q8N7P7 452 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 ERCC8Q13216 396 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 BLCAPP62952 87 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 ORMDL3Q8N138 153 aa13.1□□□□□ -0.31
SNX9-201ENST00000392185 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 FOLR2P14207 255 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 PKIAP61925 76 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 Q6AWC8 147 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 TMEM242Q9NWH2 141 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 YPEL3P61236 119 aaPredicted RBP13.09□□□□□ -0.31
SNX9-201ENST00000392185 PRR20EP86478 221 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 PRR20CP86479 221 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 PRR20DP86480 221 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 PRR20BP86481 221 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 PRR20AP86496 221 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 C8orf31Q8N9H6 132 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 SAP30O75446 220 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 FXYD7P58549 80 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 DAZAP2Q15038 168 aaPredicted RBP13.09□□□□□ -0.31
SNX9-201ENST00000392185 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 ZNF114Q8NC26 417 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 DEFB104AQ8WTQ1 72 aa13.09□□□□□ -0.31
SNX9-201ENST00000392185 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 CGB3P0DN86 165 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 CGB7P0DN87 165 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 PMCHL2Q9BQD1 86 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 ZNF138P52744 262 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 Q1RN00 199 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 STHQ8IWL8 128 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 DAZ1Q9NQZ3 744 aaKnown RBP13.08□□□□□ -0.32
SNX9-201ENST00000392185 TRAV9-1A0A075B6T8 112 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
SNX9-201ENST00000392185 SPATA45Q537H7 98 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 C9orf139Q6ZV77 190 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 KIR2DL4Q99706 377 aa13.08□□□□□ -0.32
SNX9-201ENST00000392185 ZNF256Q9Y2P7 627 aaPredicted RBP13.08□□□□□ -0.32
SNX9-201ENST00000392185 M0R143 59 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 IGKV3OR2-268A0A0C4DH90 116 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 HOXA3O43365 443 aaPredicted RBP13.07□□□□□ -0.32
SNX9-201ENST00000392185 BRWD1-AS2P59051 145 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 SOX21Q9Y651 276 aaPredicted RBP13.07□□□□□ -0.32
SNX9-201ENST00000392185 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 OVOL1O14753 267 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 EVI2AP22794 236 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 PLA2G5P39877 138 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 FOXL1Q12952 345 aa13.07□□□□□ -0.32
SNX9-201ENST00000392185 NCR2O95944 276 aa13.06□□□□□ -0.32
SNX9-201ENST00000392185 PSG3Q16557 428 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms