RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CRYGCP07315 174 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 SPRR3Q9UBC9 169 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 IGHV4-28A0A0C4DH34 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 A0A1B0GTI1 187 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 IL18BPO95998 194 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 IGHV1-8P0DP01 117 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 IL17RELQ6ZVW7 336 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 LINC01551Q86U37 167 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 H0YIZ8 118 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 KIAA1551Q9HCM1 1747 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 NOTCH3Q9UM47 2321 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 A0A0A6YYD4 124 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 HGFACQ04756 655 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 SP7Q8TDD2 431 aaPredicted RBP4.79□□□□□ -1.64
RFX3-204ENST00000382004 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
RFX3-204ENST00000382004 ZGRF1Q86YA3 2104 aa4.79□□□□□ -1.64
RFX3-204ENST00000382004 CRYBA4P53673 196 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 USMG5Q96IX5 58 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 TMEM243Q9BU79 118 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 RFNGQ9Y644 331 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 RGPD3A6NKT7 1758 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 SHISA9B4DS77 424 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 CFHR2P36980 270 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 ANKRD29Q8N6D5 301 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 PSPNO60542 156 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 IFI6P09912 130 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 VWC2Q2TAL6 325 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 PPDPFLQ8WWR9 84 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 C14orf132Q9NPU4 83 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 ARFGEF1Q9Y6D6 1849 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 MBD3L4A6NDZ8 208 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 MBD3L3A6NE82 208 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 MBD3L5A6NJ08 208 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 ANGP03950 147 aaKnown RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 PAX9P55771 341 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 MBD3L2Q8NHZ7 208 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 COL22A1Q8NFW1 1626 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 PKD1L3Q7Z443 1732 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 TRBV24-1A0A075B6N3 115 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 B4DSR2 109 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 C5orf64Q2M2E5 130 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 C8orf31Q8N9H6 132 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 DKK4Q9UBT3 224 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 ATAD5Q96QE3 1844 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 FAM223BA6NKX1 122 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 I3L3M4 83 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 ID3Q02535 119 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 FAM223AQ8IWN6 122 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 LY75O60449 1722 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 IGLV3-21P80748 117 aaPredicted RBP4.78□□□□□ -1.64
RFX3-204ENST00000382004 SLAQ13239 276 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 MINOS1Q5TGZ0 78 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 RMI2Q96E14 147 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 CARD19Q96LW7 228 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 MINOS1-NBL1R4GNA1 71 aa4.78□□□□□ -1.64
RFX3-204ENST00000382004 A8MWP6 167 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 FOXF2Q12947 444 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 LY6G6FQ5SQ64 297 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 ZNRF2Q8NHG8 242 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGF2BP2-AS1Q96M15 143 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 PATJQ8NI35 1801 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1D-8A0A087WSZ0 117 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TEX48A0A1B0GUV7 120 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 NDUFS6O75380 124 aaKnown RBP4.77□□□□□ -1.65
RFX3-204ENST00000382004 RNASE2P10153 161 aaKnown RBP4.77□□□□□ -1.65
RFX3-204ENST00000382004 MPZP25189 248 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 EFNA4P52798 201 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 BCORQ6W2J9 1755 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 SCN4AP35499 1836 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1OR2-108A0A075B7D4 117 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 OVOL3O00110 214 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 HLA-DRB4P13762 266 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 RNASE13Q5GAN3 156 aaKnown RBP4.77□□□□□ -1.65
RFX3-204ENST00000382004 TIMM17AQ99595 171 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 HLA-DRB4X5D2U9 266 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.77□□□□□ -1.65
RFX3-204ENST00000382004 A0A087WV48 116 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGKV1-9A0A0C4DH69 117 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TMEM178BH3BS89 294 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 IGHG2P01859 326 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 NTF4P34130 210 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 LINC00479Q96M42 142 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TRAV12-2A0A075B6T6 113 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 BUB1B-PAK6H3BSN5 160 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 MRPL27Q9P0M9 148 aaKnown RBP4.77□□□□□ -1.65
RFX3-204ENST00000382004 STRCQ7RTU9 1775 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 DOCK4Q8N1I0 1966 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 TRAV26-2A0A0B4J265 109 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 COLCA2A8K830 154 aa4.77□□□□□ -1.65
RFX3-204ENST00000382004 ZNF664Q8N3J9 261 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms