RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 STHQ8IWL8 128 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 NAV3Q8IVL0 2385 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 J3QLI3 93 aa9.77□□□□□ -0.85
GABPB1-203ENST00000380877 IGLC1P0CG04 106 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 DDTP30046 118 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 NSUN5P1Q3KNT7 163 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 FAM120AOSQ5T036 256 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 OR1N2Q8NGR9 330 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 F2Z2F3 143 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 DAZAP2Q15038 168 aaPredicted RBP9.76□□□□□ -0.85
GABPB1-203ENST00000380877 DTX2Q86UW9 622 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 KLHL30-AS1Q8NEE0 82 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 HIVEP3Q5T1R4 2406 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 PRR20EP86478 221 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 PRR20CP86479 221 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 PRR20DP86480 221 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 PRR20BP86481 221 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 PRR20AP86496 221 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 LCNL1Q6ZST4 164 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 IGFBPL1Q8WX77 278 aa9.76□□□□□ -0.85
GABPB1-203ENST00000380877 WNK1Q9H4A3 2382 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 H3BVH4 76 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 NRN1Q9NPD7 142 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 ABCA2Q9BZC7 2435 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 C7orf71A4D174 169 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 UBE2L6O14933 153 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 SLC25A34Q6PIV7 304 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 DMRT1Q9Y5R6 373 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 DYSFO75923 2080 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 IGHV4-30-2A0A087WSY4 118 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 GGTLC3B5MD39 225 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 FCN3O75636 299 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 Q86TA4 180 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 OR4C5Q8NGB2 326 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 C5orf30Q96GV9 206 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 KLF2Q9Y5W3 355 aaPredicted RBP9.75□□□□□ -0.85
GABPB1-203ENST00000380877 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
GABPB1-203ENST00000380877 A6NDN8 102 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 PPBPP02775 128 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 Q6ZPA2 131 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 THAP8Q8NA92 274 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 SLC25A2Q9BXI2 301 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 ZNF324O75467 553 aaPredicted RBP9.74□□□□□ -0.85
GABPB1-203ENST00000380877 IGLV2-14P01704 120 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 NUP35Q8NFH5 326 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 NCKAP5O14513 1909 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 CHD3Q12873 2000 aaKnown RBP9.74□□□□□ -0.85
GABPB1-203ENST00000380877 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 PRORYQ9H606 182 aa9.74□□□□□ -0.85
GABPB1-203ENST00000380877 SH2D1AO60880 128 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 ATP5LO75964 103 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 CACNG7P62955 275 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 LYZL1Q6UWQ5 148 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 UBE2CO00762 179 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 SAP30O75446 220 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 IGLV1-47P01700 117 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 ZNF25P17030 456 aaPredicted RBP9.73□□□□□ -0.85
GABPB1-203ENST00000380877 VWC2Q2TAL6 325 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 LINC00614P0C842 121 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 PRR31Q5SQ13 230 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 GFI1BQ5VTD9 330 aa9.73□□□□□ -0.85
GABPB1-203ENST00000380877 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
GABPB1-203ENST00000380877 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 ZNF256Q9Y2P7 627 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-203ENST00000380877 C5orf52A6NGY3 159 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 C10orf105Q8TEF2 133 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 NRGNQ92686 78 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 CENPVL3A0A0U1RRI6 287 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 HINT1P49773 126 aaPredicted RBP9.72□□□□□ -0.85
GABPB1-203ENST00000380877 EMP1P54849 157 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 OR10J3Q5JRS4 329 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 HTTP42858 3142 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 PRDM13Q9H4Q3 707 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 TMEM160Q9NX00 188 aa9.72□□□□□ -0.85
GABPB1-203ENST00000380877 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
GABPB1-203ENST00000380877 J3QR89 54 aa9.71□□□□□ -0.85
GABPB1-203ENST00000380877 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.85
GABPB1-203ENST00000380877 TTC9CQ8N5M4 171 aa9.71□□□□□ -0.85
GABPB1-203ENST00000380877 RITA1Q96K30 269 aa9.71□□□□□ -0.85
GABPB1-203ENST00000380877 RPLP1P05386 114 aaKnown RBP9.71□□□□□ -0.85
GABPB1-203ENST00000380877 ODF3L1Q8IXM7 274 aa9.71□□□□□ -0.85
GABPB1-203ENST00000380877 HIST3H2BBQ8N257 126 aa9.71□□□□□ -0.85
GABPB1-203ENST00000380877 TRGV11A0A075B6L2 103 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 H3BRN7 92 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 ERCC8Q13216 396 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 C12orf54Q6X4T0 127 aa9.71□□□□□ -0.86
GABPB1-203ENST00000380877 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms