RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NDUFA4L2Q9NRX3 87 aa9.96□□□□□ -0.81
PRPF40B-202ENST00000380281 ATP5G2Q06055 141 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 PSG3Q16557 428 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 PET117Q6UWS5 81 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 FBXL15Q9H469 300 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 C1RLQ9NZP8 487 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 LIPFP07098 398 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 SCGB1A1P11684 91 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 GOLT1AQ6ZVE7 132 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 OR4C13Q8NGP0 309 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 C19orf24Q9BVV8 132 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
PRPF40B-202ENST00000380281 MBD3L4A6NDZ8 208 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 MBD3L3A6NE82 208 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 MBD3L5A6NJ08 208 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 CGB1A6NKQ9 187 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 ADIPOQQ15848 244 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 CFAP161Q6P656 301 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 SH2D6Q7Z4S9 175 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 MBD3L2Q8NHZ7 208 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 C17orf77Q96MU5 243 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 CTSZQ9UBR2 303 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 K7ERJ3 54 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 CNIH1O95406 144 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 FGF6P10767 208 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 TNFRSF1AP19438 455 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 HBBP68871 147 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 WFDC2Q14508 124 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 PRR30Q53SZ7 412 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 OR8A1Q8NGG7 326 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 ZNF48Q96MX3 618 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 NOTCH3Q9UM47 2321 aa9.95□□□□□ -0.82
PRPF40B-202ENST00000380281 IGLV3-9A0A075B6K5 115 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 IGHV3-23P01764 117 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 FXYD5Q96DB9 178 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 C17orf100A8MU93 164 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 P01737 135 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 COL8A1P27658 744 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 CFHR2P36980 270 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 LINC01545Q5VT33 79 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 FAM222BQ8WU58 562 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 GEMIN7Q9H840 131 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 LINC00312Q9Y6C7 94 aa9.94□□□□□ -0.82
PRPF40B-202ENST00000380281 IGKV1D-37A0A075B6S9 117 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 TCRBV4S1A1TA0A5B7 111 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 CR1LQ2VPA4 569 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 OSR1Q8TAX0 266 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 C16orf97H3BN30 126 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 CHEK1O14757 476 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 NMUP48645 174 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 HSPB8Q9UJY1 196 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 A0A0G2JNJ9 132 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 A1L4Q6 167 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 VMA21Q3ZAQ7 101 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 ETDBQ3ZM63 59 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 IGFL4Q6B9Z1 124 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 PCP2Q8IVA1 136 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 Q9UFV3 132 aa9.93□□□□□ -0.82
PRPF40B-202ENST00000380281 SERTM2A0A1B0GWG4 89 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 M0R3E3 92 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 INSL3P51460 131 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 HES1Q14469 280 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 PRSS33Q8NF86 280 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 Q9H3A6 140 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 INSIG2Q9Y5U4 225 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 TM4SF5O14894 197 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 GCSHP23434 173 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 GATA3P23771 443 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 RPL27AP46776 148 aaKnown RBP9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 WFDC3Q8IUB2 231 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 OR1L4Q8NGR5 311 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 ARPC1AQ92747 370 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 DOPEY2Q9Y3R5 2298 aa9.92□□□□□ -0.82
PRPF40B-202ENST00000380281 A8MWL6 223 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 FAM106CPP0CH98 169 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 FAM106AQ4KMX7 169 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 FAM162BQ5T6X4 162 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 SRSF12Q8WXF0 261 aaKnown RBP9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 APOHP02749 345 aaPredicted RBP9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 GFRALQ6UXV0 394 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 ZNF833PQ6ZTB9 187 aa9.91□□□□□ -0.82
PRPF40B-202ENST00000380281 BCL6BQ8N143 479 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms