RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 SPINK4O60575 86 aa11.68□□□□□ -0.54
PRNP-201ENST00000379440 EGR2P11161 476 aaPredicted RBP11.68□□□□□ -0.54
PRNP-201ENST00000379440 TSPOP30536 169 aa11.68□□□□□ -0.54
PRNP-201ENST00000379440 IBA57Q5T440 356 aaKnown RBP11.68□□□□□ -0.54
PRNP-201ENST00000379440 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
PRNP-201ENST00000379440 BAGE2Q86Y30 109 aa11.68□□□□□ -0.54
PRNP-201ENST00000379440 Q8N9W7 124 aa11.68□□□□□ -0.54
PRNP-201ENST00000379440 NPIPB5A8MRT5 1133 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 FAM106CPP0CH98 169 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 CBLN1P23435 193 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 TCL1AP56279 114 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 ERASQ7Z444 233 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 BCL6BQ8N143 479 aaPredicted RBP11.67□□□□□ -0.54
PRNP-201ENST00000379440 TTC9CQ8N5M4 171 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 BTF3L4Q96K17 158 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 HSPB9Q9BQS6 159 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 SERTAD4Q9NUC0 356 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 IGHV3OR16-10A0A075B7F0 116 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
PRNP-201ENST00000379440 SLC35B1P78383 322 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 SIGMAR1Q99720 223 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
PRNP-201ENST00000379440 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 FAM168AQ92567 244 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 CCL19Q99731 98 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 Q9H3A6 140 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 OR2J3O76001 311 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 IL4P05112 153 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 SMAGPQ0VAQ4 97 aa11.66□□□□□ -0.54
PRNP-201ENST00000379440 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 CENPVL3A0A0U1RRI6 287 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.54
PRNP-201ENST00000379440 F8W735 103 aaPredicted RBP11.65□□□□□ -0.54
PRNP-201ENST00000379440 ADMP35318 185 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
PRNP-201ENST00000379440 USP9XQ93008 2570 aaPredicted RBP11.65□□□□□ -0.54
PRNP-201ENST00000379440 NPFFO15130 113 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 IER3P46695 156 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 UBE2G1P62253 170 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 PET117Q6UWS5 81 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 RNF125Q96EQ8 232 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
PRNP-201ENST00000379440 ABCA2Q9BZC7 2435 aa11.65□□□□□ -0.55
PRNP-201ENST00000379440 A4D1N5 150 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 PRB1P04280 392 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 PRB4P10163 310 aaPredicted RBP11.64□□□□□ -0.55
PRNP-201ENST00000379440 MFAP4P55083 255 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 Q56UQ5 140 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 EXOC3-AS1Q8N2X6 119 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 TRAV9-1A0A075B6T8 112 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 DPF1Q92782 380 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 C1RLQ9NZP8 487 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 CELSR1Q9NYQ6 3014 aa11.64□□□□□ -0.55
PRNP-201ENST00000379440 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
PRNP-201ENST00000379440 FCGR2BP31994 310 aaPredicted RBP11.63□□□□□ -0.55
PRNP-201ENST00000379440 C5orf17Q8NAS9 161 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 C21orf62Q9NYP8 219 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
PRNP-201ENST00000379440 LINC01548A6NM66 108 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 H0Y8G0 127 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 H3BRN7 92 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 TCRAP04437 139 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 MTURNQ8N3F0 131 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 PIMREGQ9BSJ6 248 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
PRNP-201ENST00000379440 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 WI2-2373I1.2A0A1W2PRP0 233 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 HLA-DRB1P01911 266 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
PRNP-201ENST00000379440 GRIFINA4D1Z8 144 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 HERV-K104P63124 156 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 PAX8Q06710 450 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 C10orf105Q8TEF2 133 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 FBXL7Q9UJT9 491 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 SMIM27A0A1W2PRY6 76 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 ATP6V0E1O15342 81 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 ATP5J2P56134 94 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
PRNP-201ENST00000379440 C7orf69Q9H7B7 122 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 THYN1Q9P016 225 aa11.62□□□□□ -0.55
PRNP-201ENST00000379440 TRAV8-1A0A0A6YYK1 113 aa11.61□□□□□ -0.55
PRNP-201ENST00000379440 MRPL54Q6P161 138 aaKnown RBP11.61□□□□□ -0.55
PRNP-201ENST00000379440 NRGNQ92686 78 aa11.61□□□□□ -0.55
PRNP-201ENST00000379440 GPR82Q96P67 336 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms