RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 MYLKQ15746 1914 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 A0A087WWC5 75 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 YPEL1O60688 119 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 YPEL2Q96QA6 119 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 LAMB1P07942 1786 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 NCKAP5O14513 1909 aa10.87□□□□□ -0.67
HIPK3-202ENST00000379016 I3L3M4 83 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 F6UB75 175 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 GPHB5Q86YW7 130 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 IGLL5B9A064 214 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 RPL34P49207 117 aaKnown RBP10.86□□□□□ -0.67
HIPK3-202ENST00000379016 LINC01559Q495D7 138 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 LINC01356Q8N9X3 169 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 PLXNB2O15031 1838 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 NHLRC3Q5JS37 347 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 SLC25A48Q6ZT89 311 aaKnown RBP10.86□□□□□ -0.67
HIPK3-202ENST00000379016 BTAF1O14981 1849 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 ZNF672Q499Z4 452 aaPredicted RBP10.86□□□□□ -0.67
HIPK3-202ENST00000379016 ORMDL1Q9P0S3 153 aa10.86□□□□□ -0.67
HIPK3-202ENST00000379016 RICTORQ6R327 1708 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.85□□□□□ -0.67
HIPK3-202ENST00000379016 IGKV1D-12P01611 117 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 IGHV4-59P01825 116 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 FOCADQ5VW36 1801 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 SAP25Q8TEE9 199 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 Q96MF0 132 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 SIGLEC1Q9BZZ2 1709 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
HIPK3-202ENST00000379016 ARMS2P0C7Q2 107 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 CTSGP08311 255 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 C1orf100Q5SVJ3 147 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 TMEM200BQ69YZ2 307 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 DOCK1Q14185 1865 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 ERVH48-1M5A8F1 160 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 LINC01619G3V211 115 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 CDKN1BP46527 198 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 ATAD5Q96QE3 1844 aa10.84□□□□□ -0.67
HIPK3-202ENST00000379016 ZNF831Q5JPB2 1677 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 FAM90A1Q86YD7 464 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 PPP1R3EQ9H7J1 279 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 SYS1-DBNDD2H3BUS1 97 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 COL11A1P12107 1806 aaPredicted RBP10.83□□□□□ -0.68
HIPK3-202ENST00000379016 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 VSIG2Q96IQ7 327 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 IGHV1-3A0A0C4DH29 117 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 OVOL3O00110 214 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 MST1LQ2TV78 715 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 LOC285556D6RIA3 1793 aa10.83□□□□□ -0.68
HIPK3-202ENST00000379016 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 SPANXA1Q9NS26 97 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 ETV2O00321 342 aaPredicted RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 IGLV10-54A0A075B6I4 117 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 TRBV5-7A0A0A0MS05 114 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 GZMMP51124 257 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 TNRC6AQ8NDV7 1962 aaKnown RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 DDX60LQ5H9U9 1706 aaKnown RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 UBE2CO00762 179 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 AMBPP02760 352 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 NREPQ16612 68 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 WIPF2Q8TF74 440 aaPredicted RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 PTPRDP23468 1912 aa10.82□□□□□ -0.68
HIPK3-202ENST00000379016 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BKO60814 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BJP06899 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BOP23527 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BBP33778 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BDP58876 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BCP62807 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST2H2BEQ16778 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BHQ93079 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BNQ99877 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 HIST1H2BMQ99879 126 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 IGHV3-30P01768 117 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 BAALC-AS2P0C853 105 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 IGHV3-30-3P0DP02 117 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 IGHV3-30-5P0DP03 117 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 ZNF497Q6ZNH5 498 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 LINC01551Q86U37 167 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 SRSF3P84103 164 aaKnown RBP10.81□□□□□ -0.68
HIPK3-202ENST00000379016 DOCK4Q8N1I0 1966 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
HIPK3-202ENST00000379016 LY6HO94772 140 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms