RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 PF4V1P10720 104 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 CSN1S1P47710 185 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 PSG9Q00887 426 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 MRPL54Q6P161 138 aaKnown RBP11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 LRRC75A-AS1Q8N1F1 130 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 DAZAP1Q96EP5 407 aaKnown RBP11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 GPR61Q9BZJ8 451 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
RAB3IP-203ENST00000378809 IGHV3OR16-13A0A075B7E8 117 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 IGHV3-74A0A0B4J1X5 117 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 SNURFLB1AK76 121 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 HIST3H2BBQ8N257 126 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 CIARTQ8N365 385 aaPredicted RBP11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 GRAMD2BQ96HH9 432 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.587e-17■■■■■ 33.5
RAB3IP-203ENST00000378809 NBPF19A0A087WUL8 3843 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 IGHV3-49A0A0A0MS15 119 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 ZNF785A8K8V0 405 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 DIRC3C9JPN6 131 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 IGLV2-11P01706 119 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 P01737 135 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 ARL3P36405 182 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 RAB4BP61018 213 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 TMEM190Q8WZ59 177 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 METTL26Q96S19 204 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 ASCL2Q99929 193 aa11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 MRPL18Q9H0U6 180 aaKnown RBP11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
RAB3IP-203ENST00000378809 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 PPIFP30405 207 aaKnown RBP11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 HIST2H2BCQ6DN03 193 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 TMEM183AQ8IXX5 376 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 SMAD5-AS1Q9Y6J3 95 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 BUB3O43684 328 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 FABP4P15090 132 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 RAB9AP51151 201 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 PSG3Q16557 428 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 KLK15Q9H2R5 256 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
RAB3IP-203ENST00000378809 NAV2Q8IVL1 2488 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 CLPSL1A2RUU4 121 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 IZUMO1RA6ND01 250 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 TMEM95Q3KNT9 176 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 IGFL4Q6B9Z1 124 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 Q71RC1 249 aaPredicted RBP11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 NEU1Q99519 415 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 NAT8BQ9UHF3 227 aa11.41□□□□□ -0.58
RAB3IP-203ENST00000378809 PCP4L1A6NKN8 68 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 H3BUA1 57 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 APOHP02749 345 aaPredicted RBP11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 SMIM6P0DI80 62 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 PLA2G2AP14555 144 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 GNB1LQ9BYB4 327 aa11.4□□□□□ -0.58
RAB3IP-203ENST00000378809 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 HIGD1CA8MV81 97 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 J3QKU1 62 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 NUP35Q8NFH5 326 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 OR10D4PQ8NGN7 298 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 ATP6V0BQ99437 205 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 ZNF331Q9NQX6 463 aaPredicted RBP11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 ZNF492Q9P255 531 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 ZFP30Q9Y2G7 519 aa11.4□□□□□ -0.59
RAB3IP-203ENST00000378809 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
RAB3IP-203ENST00000378809 HLA-DMBP28068 263 aa11.39□□□□□ -0.59
RAB3IP-203ENST00000378809 TRBV6-1A0A0K0K1D8 114 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 GRIFINA4D1Z8 144 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 CHEK1O14757 476 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 ZC2HC1AQ96GY0 325 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 A8MWL6 223 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 MT-ND6P03923 174 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 CYB5R2Q6BCY4 276 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 CSPG4Q6UVK1 2322 aa11.38□□□□□ -0.59
RAB3IP-203ENST00000378809 A0A0G2JLM5 398 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 ZNF705FA8MVS1 300 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 ZNF253O75346 499 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 COX19Q49B96 90 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 C1orf194Q5T5A4 169 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 PACRGQ96M98 296 aaPredicted RBP11.37□□□□□ -0.59
RAB3IP-203ENST00000378809 HIST1H2BLQ99880 126 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms