RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 KIR2DL5AQ8N109 375 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 OR10G4Q8NGN3 311 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 HYLS1Q96M11 299 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
SSU72-203ENST00000378725 ZNF586Q9NXT0 402 aa13.81□□□□□ -0.2
SSU72-203ENST00000378725 BCL2L11O43521 198 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
SSU72-203ENST00000378725 RPL35AP18077 110 aaKnown RBP13.8□□□□□ -0.2
SSU72-203ENST00000378725 RAB2AP61019 212 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 CD300CQ08708 224 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 LGALSLQ3ZCW2 172 aaPredicted RBP13.8□□□□□ -0.2
SSU72-203ENST00000378725 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 TRPT1Q86TN4 253 aaKnown RBP13.8□□□□□ -0.2
SSU72-203ENST00000378725 STHQ8IWL8 128 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 LRRC20Q8TCA0 184 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 OR51M1Q9H341 326 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 RPRMQ9NS64 109 aa13.8□□□□□ -0.2
SSU72-203ENST00000378725 TRBV19A0A075B6N1 114 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 KANTRA0A1W2PQU2 76 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 H3BMM0 161 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 UBE2CO00762 179 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 ZNF253O75346 499 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 PYYP10082 97 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 APOC4P55056 127 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 FOXI2Q6ZQN5 318 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
SSU72-203ENST00000378725 ZNF503Q96F45 646 aa13.79□□□□□ -0.2
SSU72-203ENST00000378725 SAV1Q9H4B6 383 aaPredicted RBP13.79□□□□□ -0.2
SSU72-203ENST00000378725 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 H3BTX0 84 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 SLC17A3O00476 420 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 SPP1P10451 314 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 TAS2R45P59539 299 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 PSG3Q16557 428 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 RNF182Q8N6D2 247 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 FXYD5Q96DB9 178 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 PAXXQ9BUH6 204 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 CSTL1Q9H114 145 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 CLEC5AQ9NY25 188 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
SSU72-203ENST00000378725 NDUFB4O95168 129 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 NBEAP1P0C6P0 100 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 HLA-DMBP28068 263 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 DEFB1P60022 68 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 PDE6HQ13956 83 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 KHDC3LQ587J8 217 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 TMEM41BQ5BJD5 291 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 GDF5OSQ5U4N7 250 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 FAM122CQ6P4D5 195 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 RNF141Q8WVD5 230 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 CLUHP3Q96NS8 147 aa13.77□□□□□ -0.21
SSU72-203ENST00000378725 A0A0J9YX75 114 aa13.76□□□□□ -0.21
SSU72-203ENST00000378725 EBLN2Q6P2I7 272 aa13.76□□□□□ -0.21
SSU72-203ENST00000378725 SPATA25Q9BR10 227 aa13.76□□□□□ -0.21
SSU72-203ENST00000378725 ZNF471Q9BX82 626 aaPredicted RBP13.76□□□□□ -0.21
SSU72-203ENST00000378725 ZMAT4Q9H898 229 aa13.76□□□□□ -0.21
SSU72-203ENST00000378725 F6UB75 175 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 OR7C2O60412 319 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 PFDN1O60925 122 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 OR10J4P0C629 311 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 CDC34P49427 236 aaPredicted RBP13.75□□□□□ -0.21
SSU72-203ENST00000378725 EIF5AP63241 154 aaKnown RBP13.75□□□□□ -0.21
SSU72-203ENST00000378725 PSG9Q00887 426 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 MORN3Q6PF18 240 aaPredicted RBP13.75□□□□□ -0.21
SSU72-203ENST00000378725 PQLC2Q6ZP29 291 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 Q6ZWC4 215 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 RAB24Q969Q5 203 aa13.75□□□□□ -0.21
SSU72-203ENST00000378725 A8MTW9 85 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
SSU72-203ENST00000378725 GIG44P09565 113 aaPredicted RBP13.74□□□□□ -0.21
SSU72-203ENST00000378725 SEC11BP0C7V7 166 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 ZFP69Q49AA0 526 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 ZNF738Q8NE65 137 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 BLNKQ8WV28 456 aa13.74□□□□□ -0.21
SSU72-203ENST00000378725 ACTR3CQ9C0K3 210 aaPredicted RBP13.74□□□□□ -0.21
SSU72-203ENST00000378725 DNAH9Q9NYC9 4486 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 AKR1C8PQ5T2L2 129 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 BAP18Q8IXM2 172 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 STOML3Q8TAV4 291 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 RPUSD4Q96CM3 377 aaKnown RBP13.73□□□□□ -0.21
SSU72-203ENST00000378725 PLA2G2EQ9NZK7 142 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 TP53TG1Q9Y2A0 90 aa13.73□□□□□ -0.21
SSU72-203ENST00000378725 ZNF705FA8MVS1 300 aaPredicted RBP13.72□□□□□ -0.21
SSU72-203ENST00000378725 DUSP14O95147 198 aaKnown RBP13.72□□□□□ -0.21
SSU72-203ENST00000378725 C9orf62Q8N4C0 152 aa13.72□□□□□ -0.21
SSU72-203ENST00000378725 OR8A1Q8NGG7 326 aa13.72□□□□□ -0.21
SSU72-203ENST00000378725 MRPL53Q96EL3 112 aaKnown RBP13.72□□□□□ -0.21
SSU72-203ENST00000378725 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
SSU72-203ENST00000378725 PRELID1Q9Y255 219 aa13.72□□□□□ -0.21
SSU72-203ENST00000378725 U3KQK5 164 aa13.72□□□□□ -0.21
SSU72-203ENST00000378725 HMGB3O15347 200 aaKnown RBP13.71□□□□□ -0.21
SSU72-203ENST00000378725 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms